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CASTOR1 cytosolic arginine sensor for mTORC1 subunit 1 [ Bos taurus (cattle) ]

Gene ID: 506974, updated on 5-Mar-2024

Summary

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Official Symbol
CASTOR1provided by VGNC
Official Full Name
cytosolic arginine sensor for mTORC1 subunit 1provided by VGNC
Primary source
VGNC:VGNC:26791
See related
BGD:BT16504; Ensembl:ENSBTAG00000018084
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
GATSL3
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (69300856..69305382, complement)

Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene LIF interleukin 6 family cytokine Neighboring gene oncostatin M Neighboring gene TBC1 domain family member 10A Neighboring gene splicing factor 3a subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arginine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to L-arginine IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic arginine sensor for mTORC1 subunit 1
Names
GATS protein like 3
GATS-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081514.1 → NP_001074983.1  cytosolic arginine sensor for mTORC1 subunit 1

    See identical proteins and their annotated locations for NP_001074983.1

    Status: PROVISIONAL

    Source sequence(s)
    BT026316
    UniProtKB/Swiss-Prot
    Q0V8A3
    Related
    ENSBTAP00000093296.1, ENSBTAT00000107203.1
    Conserved Domains (1) summary
    pfam13840
    Location:261 → 322
    ACT_7; ACT domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    69300856..69305382 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005218047.5 → XP_005218104.1  cytosolic arginine sensor for mTORC1 subunit 1 isoform X1

    Related
    ENSBTAP00000024074.5, ENSBTAT00000024074.6
    Conserved Domains (1) summary
    pfam13840
    Location:262 → 323
    ACT_7; ACT domain
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0V8A3.1 GenPept UniProtKB/Swiss-Prot:Q0V8A3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.