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PLA2G16 phospholipase A2, group XVI [ Bos taurus (cattle) ]

Gene ID: 506802, updated on 16-Jan-2024

Summary

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Gene symbol
PLA2G16
Gene description
phospholipase A2, group XVI
See related
BGD:BT21035; Ensembl:ENSBTAG00000015248
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
HRASLS3
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Genomic context

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Location:
chromosome: 29
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (41961276..41994238, complement)

Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene phospholipase A and acyltransferase 3 Neighboring gene phospholipase A and acyltransferase 3 Neighboring gene atlastin GTPase 3 Neighboring gene reticulon 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Haplotype combinations of AdPLA gene polymorphisms associate with growth traits in Chinese cattle. Sun J, et al. Mol Biol Rep, 2012 Jun. PMID 22311034
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Single nucleotide polymorphisms in the adipose specific phospholipase A2 are associated with growth traits in cattle.
    Title: Haplotype combinations of AdPLA gene polymorphisms associate with growth traits in Chinese cattle.
Submit: New GeneRIF Correction

General gene information

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Homology

Clone Names

  • MGC140776

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase A1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acylphosphatidylethanolamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
group XVI phospholipase A2
Names
HRAS-like suppressor 3
NP_001068748.1
XP_005227078.2
XP_005227079.2
XP_024842800.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075280.2 → NP_001068748.1  group XVI phospholipase A2

    See identical proteins and their annotated locations for NP_001068748.1

    Status: PROVISIONAL

    Source sequence(s)
    BC118454
    UniProtKB/TrEMBL
    A0A3Q1NMD6, F6QD56, Q17QB4
    Related
    ENSBTAP00000073750.2, ENSBTAT00000078451.2
    Conserved Domains (1) summary
    pfam04970
    Location:19 → 125
    LRAT; Lecithin retinol acyltransferase

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    41961276..41994238 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005227022.5 → XP_005227079.2  group XVI phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1NMD6, F6QD56, Q17QB4
    Conserved Domains (1) summary
    pfam04970
    Location:19 → 125
    LRAT; Lecithin retinol acyltransferase

  2. XM_024987032.2 → XP_024842800.1  group XVI phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1NMD6, F6QD56, Q17QB4
    Conserved Domains (1) summary
    pfam04970
    Location:19 → 125
    LRAT; Lecithin retinol acyltransferase

  3. XM_005227021.5 → XP_005227078.2  group XVI phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1NMD6, F6QD56, Q17QB4
    Conserved Domains (1) summary
    pfam04970
    Location:19 → 125
    LRAT; Lecithin retinol acyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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