COLEC12 collectin subfamily member 12 [Bos taurus (cattle)] - Gene

Summary

Official Symbol: COLEC12provided by VGNC
Official Full Name: collectin subfamily member 12provided by VGNC
Primary source: VGNC:VGNC:27579
See related: Ensembl:ENSBTAG00000007705
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 24

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	24	NC_037351.1 (35248808..35434069, complement)

Chromosome 24 - NC_037351.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037351.1 Chromosome 24 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

AF018088 (e-PCR)
- UniSTS:105084

COLEC12 (e-PCR)
- UniSTS:278223

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables signaling receptor activity	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in collagen-containing extracellular matrix	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: collectin-12

Names: CL-P1; collectin placenta protein 1; collectin sub-family member 12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001101843.1 → NP_001095313.1 collectin-12

See identical proteins and their annotated locations for NP_001095313.1

Status: PROVISIONAL

Source sequence(s)

BC149193

UniProtKB/Swiss-Prot

A6QP79

UniProtKB/TrEMBL

A0A3Q1N1S7

Related

ENSBTAP00000044662.3, ENSBTAT00000047455.4

Conserved Domains (3) summary

cd03590
Location:607 → 732

CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

pfam01391
Location:454 → 569

Collagen; Collagen triple helix repeat (20 copies)

cl19580
Location:51 → 430

YhgE; Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown]