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sdf2.L stromal cell derived factor 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 494694, updated on 17-Aug-2024

Summary

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Official Symbol
sdf2.L
Official Full Name
stromal cell derived factor 2 L homeolog
Primary source
Xenbase:XB-GENE-865856
Locus tag
XELAEV_18011705mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
sdf2
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Genomic context

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See sdf2.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (34452312..34457893, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (33384237..33389817, complement)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase-related protein Neighboring gene bridge-like lipid transfer protein family member 2 L homeolog Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene SPT6 homolog, histone chaperone L homeolog Neighboring gene protein interacting with cyclin A1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
stromal cell derived factor 2 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094536.2 → NP_001088005.1  stromal cell derived factor 2 L homeolog precursor

    See identical proteins and their annotated locations for NP_001088005.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082685
    UniProtKB/TrEMBL
    A0A974DLT2, Q640E3
    Conserved Domains (2) summary
    smart00472
    Location:90 → 144
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    pfam02815
    Location:39 → 185
    MIR; MIR domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    34452312..34457893 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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