1: GPR143 G protein-coupled receptor 143 [ Homo sapiens ]

GeneID: 4935 updated 10-Nov-2009

[Top][Help]Summary

Official Symbol
GPR143provided by HGNC
Official Full Name
G protein-coupled receptor 143provided by HGNC
Primary Source
HGNC:20145
See related
Ensembl:ENSG00000101850; HPRD:02355; MIM:300808
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
OA1; GPR143
Summary
Ocular albinism type 1 protein is a conserved integral membrane protein with seven transmembrane domains. It is expressed in the eye and epidermal melanocytes. [provided by RefSeq]

[Top][Help]Genomic regions, transcripts, and products

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into Function What's a GeneRIF?

PubMed 1. Our results confirm that GPR143 is the major locus for X_linked ocular albinism and that exon 2 is a region of high susceptibility to deletions.
PubMed 2. A Chinese family with X-linked ocular albinism and partial deletion of GPR143, is reported.
PubMed 3. Results suggest that this novel mutation in GPR143 is associated with the congenital nystagmus observed in this Chinese family.
PubMed 4. The novel mutation p.G315X in the OA1 gene was identified in a Chinese family with ocular albinism, which is predicted to generate a premature stop codon.
PubMed 5. These results expand the mutation spectrum of GPR143, and demonstrate the clinical characteristics of OA1 among the Chinese.
PubMed 6. Results illustrate an autocrine loop between OA1 and tyrosinase linked through L-DOPA, and this loop includes the secretion of at least one very potent retinal neurotrophic factor.
PubMed 7. Panretinal function in OA1 is within normal limits at all ages, consistent with previous reports in generalized albinism.
PubMed 8. These results indicate that this novel GPR143 mutation is associated with the congenital nystagmus observed in this Chinese family.
PubMed 9. eight new mutations located in the coding region of the gene are identified.
PubMed 10. Two novel mutations in OA1 gene were identified in two families with ocular albinism. Identified mutations are likely loss-of-function mutations. Mutations in OA1 gene are associated with majority of X-linked ocular albinism cases.
PubMed 11. Our results indicate that a mutation in the GPR143 gene can cause a variant form of ocular albinism, with congenital nystagmus as the most prominent and only consistent finding in all patients in this Chinese family.
PubMed 12. No correlation was identified between congenital nystagmus and ocular albinism 1(OA1) gene.
PubMed 13. Mutational analysis of the OA1 ocular albinism gene.
PubMed 14. Review: mutational analysis in ocular albinism type 1
PubMed 15. OA1 has been immunologically characterized as an antigen that is expressed, processed, and presented in an MHC-restricted fashion by melanoma cells, but for which there is the human equivalent of a "knockout"--i.e., complete deletion in a male patient.
PubMed 16. Mutations in the OA1 gene is associated with ocular albinism

[Top][Help]Interactions

Description ..........
  Product Interactant Other Gene Complex Source Pubs          
 
  NP_000264.1   NP_002060.3        HPRD    PubMed
 
  NP_000264.1   Succinyl CoA synthetase,beta G chain        HPRD    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:110989   BioGRID:109032        BioGRID    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:110989   BioGRID:114329        BioGRID    PubMed

[Top][Help]General gene information

Markers

PMC140306P1(e-PCR)
Links: UniSTS:270932
GPR143_2945(e-PCR)
Links: UniSTS:462218
DXS9850(e-PCR)
Links: UniSTS:474260
GDB:591575(e-PCR)
Links: UniSTS:157896
GDB:591618(e-PCR)
Links: UniSTS:157897
SGC31598(e-PCR)
Links: UniSTS:10467

Phenotypes

Ocular albinism, Nettleship-Falls type
MIM: 300500

Genotypes

See GPR143 SNP Genotype Report
See GPR143 SNP Geneview Report
See GPR143 SNP Variation Viewer Report Variation View Link

Related pseudogene(s)

1 foundReview record(s) in Gene

Homology

Homologs of the GPR143 gene The GPR143 gene is conserved in cow, mouse, rat, chicken, zebrafish, and mosquito.


Map Viewer (Mouse, Rat)

[Top][Help]General protein information

Preferred Names
G protein-coupled receptor 143
Names
G protein-coupled receptor 143
NP_000264.1
3` partial

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

Genomic

  1. NG_009074.1 RefSeqGene

    Range
    5000..45463
    Download
    GenBank FASTA Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_000273.1NP_000264.1  G protein-coupled receptor 143

    Source sequence(s)
    Z48804
    Consensus CDS
    CCDS14134.1
    UniProtKB/Swiss-Prot
    P51810
    Conserved Domains (1) summary
    pfam02101
    Location:21424
    Blast Score: 1770
    Ocular_alb; Ocular albinism type 1 protein

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000023.10

    Range
    9693453..9733916, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_167197.1 

    Range
    7575215..7615678, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000066.1

    Range
    13865374..13905836, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_927700.1 

    Range
    8263656..8304118, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000155.1

    Range
    7525733..7566033, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001842360.1 

    Range
    1316694..1356994, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein
  genomic   AC003036.1  (1..30725)   None
  genomic   AC090481.9  (2003..11741)   None
  genomic   CH471074.1   EAW98773.1
  mRNA   BC015657.2   None
  mRNA   BC068977.1   AAH68977.1
  mRNA   Z48804.1   CAA88742.1
Protein Accession   Links
P51810.2   GenPept   UniProtKB/Swiss-Prot:P51810

[Top][Help]Additional Links

Gene LinkOut

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