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TOR4A torsin family 4 member A [ Canis lupus familiaris (dog) ]

Gene ID: 491229, updated on 5-Mar-2024

Summary

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Official Symbol
TOR4Aprovided by VGNC
Official Full Name
torsin family 4 member Aprovided by VGNC
Primary source
VGNC:VGNC:47716
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
C9H9orf167
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (49266440..49271907, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (47591577..47597042, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (48388507..48393992, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (48042857..48048329, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (48341602..48347076, complement)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L10-like Neighboring gene NADPH oxidase activator 1 Neighboring gene exonuclease 3'-5' domain containing 3 Neighboring gene NOTCH regulated ankyrin repeat protein Neighboring gene negative elongation factor complex member B Neighboring gene sperm-tail PG-rich repeat containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-4A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    49266440..49271907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038677875.1 → XP_038533803.1  torsin-4A

    UniProtKB/TrEMBL
    A0A8C0JNT6
    Conserved Domains (2) summary
    pfam06309
    Location:149 → 213
    Torsin
    pfam13191
    Location:170 → 284
    AAA_16; AAA ATPase domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    48042857..48048329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038486787.1 → XP_038342715.1  torsin-4A

    Conserved Domains (2) summary
    pfam06309
    Location:149 → 213
    Torsin
    pfam13191
    Location:170 → 284
    AAA_16; AAA ATPase domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    48341602..48347076 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038612592.1 → XP_038468520.1  torsin-4A

    Conserved Domains (2) summary
    pfam06309
    Location:149 → 213
    Torsin
    pfam13191
    Location:170 → 284
    AAA_16; AAA ATPase domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    48388507..48393992 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038548655.1 → XP_038404583.1  torsin-4A

    UniProtKB/TrEMBL
    A0A8C0JNT6
    Conserved Domains (2) summary
    pfam06309
    Location:149 → 213
    Torsin
    pfam13191
    Location:170 → 284
    AAA_16; AAA ATPase domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    47591577..47597042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005625059.4 → XP_005625116.1  torsin-4A

    UniProtKB/TrEMBL
    A0A8C0JNT6
    Conserved Domains (2) summary
    pfam06309
    Location:149 → 213
    Torsin
    pfam13191
    Location:170 → 284
    AAA_16; AAA ATPase domain
Nucleotide Protein
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