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    NRTN neurturin [ Homo sapiens (human) ]

    Gene ID: 4902, updated on 22-May-2013
    Official Symbol
    NRTNprovided by HGNC
    Official Full Name
    neurturinprovided by HGNC
    Primary source
    HGNC:8007
    See related
    Ensembl:ENSG00000171119; HPRD:03604; MIM:602018; Vega:OTTHUMG00000180555
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    NTN
    Summary
    Neurturin is a member of the TGF-beta subfamily, TRN. This gene signals through RET and a GPI-linked coreceptor, and promotes survival of neuronal populations. A neurturin mutation has been described in a family with Hirschsprung Disease. [provided by RefSeq, Jul 2008]
    Location :
    19p13.3
    Sequence :
    Chromosome: 19; NC_000019.9 (5823818..5828335)
    See NRTN in Epigenomics, MapViewer

    Chromosome 19 - NC_000019.9Genomic Context describing neighboring genes Neighboring gene proline rich 22 Neighboring gene dihydrouridine synthase 3-like (S. cerevisiae) Neighboring gene fucosyltransferase 6 (alpha (1,3) fucosyltransferase) Neighboring gene fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Hirschsprung's disease

    Summary from GeneReviews: Hirschsprung Disease Overview Go to GeneReviews

    Disease Characteristics
    Hirschsprung disease (HSCR), or congenital intestinal aganglionosis, is a birth defect characterized by complete absence of neuronal ganglion cells from a portion of the intestinal tract. The aganglionic segment includes the distal rectum and a variable length of contiguous proximal intestine. In 80% of individuals, aganglionosis is restricted to the rectosigmoid colon (short-segment disease); in 15%-20%, aganglionosis extends proximal to the sigmoid colon (long-segment disease); in about 5%, aganglionosis affects the entire large intestine (total colonic aganglionosis). Rarely, the aganglionosis extends into the small bowel or even more proximally to encompass the entire bowel (total intestinal aganglionosis). HSCR is considered a neurocristopathy, a disorder of cells and tissues derived from the neural crest, and may occur as an isolated finding or as part of a multisystem disorder. Affected infants frequently present in the first two months of life with symptoms of impaired intestinal motility such as failure to pass meconium within the first 48 hours of life, constipation, emesis, abdominal pain or distention, and occasionally diarrhea. However, because the initial diagnosis of HSCR may be delayed until late childhood or adulthood, HSCR should be considered in anyone with lifelong severe constipation. Individuals with HSCR are at risk for enterocolitis and/or potentially lethal intestinal perforation.
    Diagnosis Testing
    The diagnosis of HSCR requires histopathologic demonstration of absence of enteric ganglion cells in the distal rectum. Suction biopsies of rectal mucosa and submucosa are the preferred diagnostic test in most centers because they can be performed safely without general anesthesia. Syndromes associated with HSCR are diagnosed by clinical findings, cytogenetic analysis, or in some cases, by specific molecular or biochemical tests. Isolated HSCR is a multigene disorder that has been associated with mutations in at least six different genes.
    Genetic Counseling
    Recurrence risk depends on the underlying cause.
    References
    Products Interactant Other Gene Complex Source Pubs Description
    Q99748 P56159 GFRA1    HPRD  PubMed  
    Q99748 O00451 GFRA2    HPRD  PubMed  
    Q99748 P07949 RET    HPRD  PubMed  
    BioGRID:110958 BioGRID:108942 GFRA1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:110958 BioGRID:108943 GFRA2    BioGRID  PubMed Reconstituted Complex 
    BioGRID:110958 BioGRID:111911 RET    BioGRID  PubMed Affinity Capture-Western 
    • Axon guidance, organism-specific biosystem (from REACTOME)
      Axon guidance, organism-specific biosystemAxon guidance / axon pathfinding is the process by which neurons send out axons to reach the correct targets. Growing axons have a highly motile structure at the growing tip called the growth cone, w...
    • Developmental Biology, organism-specific biosystem (from REACTOME)
      Developmental Biology, organism-specific biosystemAs a first step towards capturing the array of processes by which a fertilized egg gives rise to the diverse tissues of the body, examples of three kinds of processes have been annotated. These are a...
    • NCAM signaling for neurite out-growth, organism-specific biosystem (from REACTOME)
      NCAM signaling for neurite out-growth, organism-specific biosystemThe neural cell adhesion molecule, NCAM, is a member of the immunoglobulin (Ig) superfamily and is involved in a variety of cellular processes of importance for the formation and maintenance of the n...
    • NCAM1 interactions, organism-specific biosystem (from REACTOME)
      NCAM1 interactions, organism-specific biosystemThe neural cell adhesion molecule, NCAM1 is generally considered as a cell adhesion mediator, but it is also considered to be a signal transducing receptor molecule. NCAM1 is involved in multiple cis...

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    growth factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    receptor binding TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    MAPK cascade TAS
    Traceable Author Statement
    more info
    PubMed 
    axon guidance TAS
    Traceable Author Statement
    more info
     
    nerve development IEA
    Inferred from Electronic Annotation
    more info
     
    nervous system development TAS
    Traceable Author Statement
    more info
    PubMed 
    neural crest cell migration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    neuron projection development IDA
    Inferred from Direct Assay
    more info
    PubMed 
    transmembrane receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_008202.1 RefSeqGene

      Range
      5001..9518
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_004558.3NP_004549.1  neurturin preproprotein

      Status: REVIEWED

      Source sequence(s)
      AL161995
      Consensus CDS
      CCDS12151.1
      UniProtKB/Swiss-Prot
      Q99748
      Related
      ENSP00000302648, OTTHUMP00000264612, ENST00000303212, OTTHUMT00000451882
      Conserved Domains (1) summary
      pfam00019
      Location:107196
      Blast Score: 168
      TGF_beta; Transforming growth factor beta like domain

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000019.9 Reference GRCh37.p10 Primary Assembly

      Range
      5823818..5828335
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000151.1 Alternate HuRef

      Range
      5583694..5588209
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018930.1 Alternate CHM1_1.0

      Range
      5748283..5752800
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

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