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ELK4 ETS transcription factor ELK4 [ Canis lupus familiaris (dog) ]

Gene ID: 488574, updated on 5-Mar-2024

Summary

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Official Symbol
ELK4provided by VGNC
Official Full Name
ETS transcription factor ELK4provided by VGNC
Primary source
VGNC:VGNC:40305
See related
Ensembl:ENSCAFG00845027137
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 38
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 38 NC_051842.1 (2066704..2088917, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 38 NC_006620.4 (2162966..2185149, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 38 NC_049259.1 (2653737..2675907, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 38 NC_049298.1 (2061957..2083106, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 38 NC_049779.1 (2453513..2475688, complement)

Chromosome 38 - NC_051842.1Genomic Context describing neighboring genes Neighboring gene actin, cytoplasmic 2-like Neighboring gene major facilitator superfamily domain containing 4A Neighboring gene uncharacterized LOC111094507 Neighboring gene uncharacterized LOC100688768 Neighboring gene 60S ribosomal protein L34-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS domain-containing protein Elk-4; LOW QUALITY PROTEIN: ETS domain-containing protein Elk-4
Names
ELK4, ETS transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051842.1 Reference ROS_Cfam_1.0

    Range
    2066704..2088917 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038448318.1 → XP_038304246.1  ETS domain-containing protein Elk-4

    UniProtKB/TrEMBL
    A0A8C0JW62, A0A8C0MN70, A0A8C0T0L7, A0A8I3S671
    Related
    ENSCAFP00845037532.1, ENSCAFT00845047840.1
    Conserved Domains (1) summary
    smart00413
    Location:17 → 88
    ETS; erythroblast transformation specific domain

  2. XM_038448316.1 → XP_038304244.1  ETS domain-containing protein Elk-4

    UniProtKB/TrEMBL
    A0A8C0JW62, A0A8C0MN70, A0A8C0T0L7, A0A8I3S671
    Conserved Domains (1) summary
    smart00413
    Location:17 → 88
    ETS; erythroblast transformation specific domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049298.1 Alternate UMICH_Zoey_3.1

    Range
    2061957..2083106 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038522246.1 → XP_038378174.1  LOW QUALITY PROTEIN: ETS domain-containing protein Elk-4

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049779.1 Alternate UNSW_CanFamBas_1.0

    Range
    2453513..2475688 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038650444.1 → XP_038506372.1  ETS domain-containing protein Elk-4

    Conserved Domains (1) summary
    smart00413
    Location:17 → 88
    ETS; erythroblast transformation specific domain

  2. XM_038650443.1 → XP_038506371.1  ETS domain-containing protein Elk-4

    Conserved Domains (1) summary
    smart00413
    Location:17 → 88
    ETS; erythroblast transformation specific domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049259.1 Alternate UU_Cfam_GSD_1.0

    Range
    2653737..2675907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038586038.1 → XP_038441966.1  ETS domain-containing protein Elk-4

    UniProtKB/TrEMBL
    A0A8C0T0L7

  2. XM_038586037.1 → XP_038441965.1  ETS domain-containing protein Elk-4

    UniProtKB/TrEMBL
    A0A8C0T0L7

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006620.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    2162966..2185149 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038464203.1 → XP_038320131.1  ETS domain-containing protein Elk-4

    UniProtKB/TrEMBL
    A0A8C0JW62, A0A8C0MN70, A0A8C0T0L7, A0A8I3S671
    Conserved Domains (1) summary
    smart00413
    Location:17 → 88
    ETS; erythroblast transformation specific domain

  2. XM_038464202.1 → XP_038320130.1  ETS domain-containing protein Elk-4

    UniProtKB/TrEMBL
    A0A8C0JW62, A0A8C0MN70, A0A8C0T0L7, A0A8I3S671
    Conserved Domains (1) summary
    smart00413
    Location:17 → 88
    ETS; erythroblast transformation specific domain
Nucleotide Protein
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