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MRPL39 mitochondrial ribosomal protein L39 [ Canis lupus familiaris (dog) ]

Gene ID: 487709, updated on 5-Mar-2024

Summary

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Official Symbol
MRPL39provided by VGNC
Official Full Name
mitochondrial ribosomal protein L39provided by VGNC
Primary source
VGNC:VGNC:43396
See related
Ensembl:ENSCAFG00845014739
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 31
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 31 NC_051835.1 (21143823..21164855, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 31 NC_006613.4 (21149017..21170268, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 31 NC_049252.1 (21638587..21660585, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 31 NC_049291.1 (21162531..21183449, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 31 NC_049772.1 (21163606..21184634, complement)

Chromosome 31 - NC_051835.1Genomic Context describing neighboring genes Neighboring gene thioredoxin-like Neighboring gene uncharacterized LOC119867045 Neighboring gene microRNA mir-155 Neighboring gene U6 spliceosomal RNA Neighboring gene junctional adhesion molecule 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
39S ribosomal protein L39, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051835.1 Reference ROS_Cfam_1.0

    Range
    21143823..21164855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038443268.1 → XP_038299196.1  39S ribosomal protein L39, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C0LSB6, A0A8C0NUJ9, A0A8I3NUK2
    Related
    ENSCAFP00845020773.1, ENSCAFT00845026352.1
    Conserved Domains (1) summary
    PLN02908
    Location:26 → 270
    PLN02908; threonyl-tRNA synthetase

  2. XM_038443269.1 → XP_038299197.1  39S ribosomal protein L39, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C0NUJ9, A0A8I3NUK2
    Conserved Domains (1) summary
    PLN02908
    Location:2 → 231
    PLN02908; threonyl-tRNA synthetase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049291.1 Alternate UMICH_Zoey_3.1

    Range
    21162531..21183449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038517683.1 → XP_038373611.1  39S ribosomal protein L39, mitochondrial isoform X3

  2. XM_038517684.1 → XP_038373612.1  39S ribosomal protein L39, mitochondrial isoform X4

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049772.1 Alternate UNSW_CanFamBas_1.0

    Range
    21163606..21184634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038645642.1 → XP_038501570.1  39S ribosomal protein L39, mitochondrial isoform X1

    Conserved Domains (1) summary
    PLN02908
    Location:26 → 270
    PLN02908; threonyl-tRNA synthetase

  2. XM_038645643.1 → XP_038501571.1  39S ribosomal protein L39, mitochondrial isoform X2

    Conserved Domains (1) summary
    PLN02908
    Location:2 → 231
    PLN02908; threonyl-tRNA synthetase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049252.1 Alternate UU_Cfam_GSD_1.0

    Range
    21638587..21660585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038581726.1 → XP_038437654.1  39S ribosomal protein L39, mitochondrial isoform X5

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006613.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    21149017..21170268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005638779.4 → XP_005638836.1  39S ribosomal protein L39, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C0LSB6, A0A8C0NUJ9, A0A8I3NUK2
    Conserved Domains (1) summary
    PLN02908
    Location:26 → 270
    PLN02908; threonyl-tRNA synthetase

  2. XM_005638778.4 → XP_005638835.1  39S ribosomal protein L39, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C0NUJ9, A0A8I3NUK2
    Conserved Domains (1) summary
    PLN02908
    Location:2 → 231
    PLN02908; threonyl-tRNA synthetase
Nucleotide Protein
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