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KRT81 keratin 81 [ Canis lupus familiaris (dog) ]

Gene ID: 486531, updated on 22-Jan-2024

Summary

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Gene symbol
KRT81
Gene description
keratin 81
See related
Ensembl:ENSCAFG00845026225
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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Location:
chromosome: 27
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (2775686..2780954)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (43472174..43477436, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (43870381..43875650, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (2792435..2797701)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (2778556..2783808)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene keratin 83 Neighboring gene keratin 86 Neighboring gene uncharacterized LOC111092820 Neighboring gene uncharacterized LOC111092819 Neighboring gene keratin 88 Neighboring gene keratin, type II cuticular Hb1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of skin epidermis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratinization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
keratin, type II cuticular Hb1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    2775686..2780954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038438114.1 → XP_038294042.1  keratin, type II cuticular Hb1

    UniProtKB/TrEMBL
    A0A8C0JKS4, A0A8C0P8D1, A0A8I3PTF9
    Related
    ENSCAFP00845036365.1, ENSCAFT00845046306.1
    Conserved Domains (2) summary
    pfam00038
    Location:105 → 416
    Filament; Intermediate filament protein
    pfam16208
    Location:4 → 102
    Keratin_2_head; Keratin type II head

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    2792435..2797701
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038512808.1 → XP_038368736.1  keratin, type II cuticular Hb1

    Conserved Domains (2) summary
    pfam00038
    Location:105 → 416
    Filament; Intermediate filament protein
    pfam16208
    Location:4 → 102
    Keratin_2_head; Keratin type II head

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    2778556..2783808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038640571.1 → XP_038496499.1  keratin, type II cuticular Hb1

    Conserved Domains (2) summary
    pfam00038
    Location:105 → 416
    Filament; Intermediate filament protein
    pfam16208
    Location:4 → 102
    Keratin_2_head; Keratin type II head

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    43870381..43875650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038577731.1 → XP_038433659.1  keratin, type II cuticular Hb1

    UniProtKB/TrEMBL
    A0A8C0JKS4, A0A8C0P8D1, A0A8I3PTF9
    Conserved Domains (2) summary
    pfam00038
    Location:105 → 416
    Filament; Intermediate filament protein
    pfam16208
    Location:4 → 102
    Keratin_2_head; Keratin type II head

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    43472174..43477436 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_543657.6 → XP_543657.2  keratin, type II cuticular Hb1

    UniProtKB/TrEMBL
    A0A8C0JKS4, A0A8C0P8D1, A0A8I3PTF9
    Conserved Domains (2) summary
    pfam00038
    Location:105 → 416
    Filament; Intermediate filament protein
    pfam16208
    Location:4 → 102
    Keratin_2_head; Keratin type II head
Nucleotide Protein
Heading Accession and Version

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