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TRIM11 tripartite motif containing 11 [ Canis lupus familiaris (dog) ]

Gene ID: 482205, updated on 5-Mar-2024

Summary

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Official Symbol
TRIM11provided by VGNC
Official Full Name
tripartite motif containing 11provided by VGNC
Primary source
VGNC:VGNC:47804
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (356380..363429)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (511392..518438, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (313608..320656)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (543563..550609)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (304219..311263)

Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106559712 Neighboring gene H3.4 histone, cluster member Neighboring gene tripartite motif containing 17 Neighboring gene obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF Neighboring gene iron-sulfur cluster assembly factor IBA57

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TRIM11
XP_038350050.1
XP_038412344.1
XP_038476287.1
XP_038541973.1
XP_848259.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051818.1 Reference ROS_Cfam_1.0

    Range
    356380..363429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038686045.1 → XP_038541973.1  E3 ubiquitin-protein ligase TRIM11

    UniProtKB/TrEMBL
    A0A8C0JXL0
    Conserved Domains (4) summary
    COG1196
    Location:133 → 261
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15811
    Location:288 → 456
    SPRY_PRY_TRIM11; PRY/SPRY domain of tripartite motif-binding protein 11 (TRIM11), also known as RING finger protein 92 (RNF92)
    cd16594
    Location:13 → 57
    RING-HC_TRIM11_like_C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM11 and TRIM27, and similar proteins
    cl00034
    Location:90 → 133
    Bbox_SF; B-box-type zinc finger superfamily

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049274.1 Alternate UMICH_Zoey_3.1

    Range
    543563..550609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038494122.1 → XP_038350050.1  E3 ubiquitin-protein ligase TRIM11

    Conserved Domains (4) summary
    COG1196
    Location:133 → 261
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15811
    Location:288 → 456
    SPRY_PRY_TRIM11; PRY/SPRY domain of tripartite motif-binding protein 11 (TRIM11), also known as RING finger protein 92 (RNF92)
    cd16594
    Location:13 → 57
    RING-HC_TRIM11_like_C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM11 and TRIM27, and similar proteins
    cl00034
    Location:90 → 133
    Bbox_SF; B-box-type zinc finger superfamily

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

    Range
    304219..311263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038620359.1 → XP_038476287.1  E3 ubiquitin-protein ligase TRIM11

    Conserved Domains (4) summary
    COG1196
    Location:133 → 261
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15811
    Location:288 → 456
    SPRY_PRY_TRIM11; PRY/SPRY domain of tripartite motif-binding protein 11 (TRIM11), also known as RING finger protein 92 (RNF92)
    cd16594
    Location:13 → 57
    RING-HC_TRIM11_like_C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM11 and TRIM27, and similar proteins
    cl00034
    Location:90 → 133
    Bbox_SF; B-box-type zinc finger superfamily

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

    Range
    313608..320656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038556416.1 → XP_038412344.1  E3 ubiquitin-protein ligase TRIM11

    UniProtKB/TrEMBL
    A0A8C0JXL0
    Conserved Domains (4) summary
    COG1196
    Location:133 → 261
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15811
    Location:288 → 456
    SPRY_PRY_TRIM11; PRY/SPRY domain of tripartite motif-binding protein 11 (TRIM11), also known as RING finger protein 92 (RNF92)
    cd16594
    Location:13 → 57
    RING-HC_TRIM11_like_C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM11 and TRIM27, and similar proteins
    cl00034
    Location:90 → 133
    Bbox_SF; B-box-type zinc finger superfamily

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    511392..518438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_843166.6 → XP_848259.1  E3 ubiquitin-protein ligase TRIM11

    UniProtKB/TrEMBL
    A0A8C0JXL0
    Conserved Domains (4) summary
    COG1196
    Location:133 → 261
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15811
    Location:288 → 456
    SPRY_PRY_TRIM11; PRY/SPRY domain of tripartite motif-binding protein 11 (TRIM11), also known as RING finger protein 92 (RNF92)
    cd16594
    Location:13 → 57
    RING-HC_TRIM11_like_C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM11 and TRIM27, and similar proteins
    cl00034
    Location:90 → 133
    Bbox_SF; B-box-type zinc finger superfamily
Nucleotide Protein
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