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RAD51C RAD51 paralog C [ Canis lupus familiaris (dog) ]

Gene ID: 480573, updated on 5-Mar-2024

Summary

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Official Symbol
RAD51Cprovided by VGNC
Official Full Name
RAD51 paralog Cprovided by VGNC
Primary source
VGNC:VGNC:45319
See related
Ensembl:ENSCAFG00845023093
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (34095493..34153075)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (32524483..32581843)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (33257474..33314872)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (32882005..32939352)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (33171057..33228397)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene testis expressed 14, intercellular bridge forming factor Neighboring gene U1 spliceosomal RNA Neighboring gene U1 spliceosomal RNA Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1E Neighboring gene calmodulin 2 (phosphorylase kinase, delta) pseudogene Neighboring gene tripartite motif containing 37 Neighboring gene uncharacterized LOC111097410

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables crossover junction DNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic DNA recombinase assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Rad51C-XRCC3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in replication fork IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair protein RAD51 homolog 3
Names
RAD51 homolog C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    34095493..34153075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038677131.1 → XP_038533059.1  DNA repair protein RAD51 homolog 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PVY5
    Conserved Domains (2) summary
    PRK04301
    Location:1 → 296
    radA; DNA repair and recombination protein RadA; Validated
    cd19492
    Location:110 → 277
    Rad51C; RAD51C recombinase

  2. XM_038677130.1 → XP_038533058.1  DNA repair protein RAD51 homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LR27, A0A8C0PVY5, A0A8I3PM42, A0A8P0NJ31
    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

  3. XM_038677129.1 → XP_038533057.1  DNA repair protein RAD51 homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LR27, A0A8C0PVY5, A0A8I3PM42, A0A8P0NJ31
    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

  4. XM_038677128.1 → XP_038533056.1  DNA repair protein RAD51 homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LR27, A0A8C0PVY5, A0A8I3PM42, A0A8P0NJ31
    Related
    ENSCAFP00845031946.1, ENSCAFT00845040803.1
    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

RNA

  1. XR_005432367.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    32882005..32939352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038486118.1 → XP_038342046.1  DNA repair protein RAD51 homolog 3 isoform X2

    Conserved Domains (2) summary
    PRK04301
    Location:1 → 296
    radA; DNA repair and recombination protein RadA; Validated
    cd19492
    Location:110 → 277
    Rad51C; RAD51C recombinase

  2. XM_038486117.1 → XP_038342045.1  DNA repair protein RAD51 homolog 3 isoform X1

    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

  3. XM_038486116.1 → XP_038342044.1  DNA repair protein RAD51 homolog 3 isoform X1

    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

  4. XM_038486115.1 → XP_038342043.1  DNA repair protein RAD51 homolog 3 isoform X1

    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

RNA

  1. XR_005330908.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    33171057..33228397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038611893.1 → XP_038467821.1  DNA repair protein RAD51 homolog 3 isoform X2

    Conserved Domains (2) summary
    PRK04301
    Location:1 → 296
    radA; DNA repair and recombination protein RadA; Validated
    cd19492
    Location:110 → 277
    Rad51C; RAD51C recombinase

  2. XM_038611892.1 → XP_038467820.1  DNA repair protein RAD51 homolog 3 isoform X1

    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

  3. XM_038611891.1 → XP_038467819.1  DNA repair protein RAD51 homolog 3 isoform X1

    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

  4. XM_038611890.1 → XP_038467818.1  DNA repair protein RAD51 homolog 3 isoform X1

    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

RNA

  1. XR_005399038.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    33257474..33314872
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038547930.1 → XP_038403858.1  DNA repair protein RAD51 homolog 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PVY5
    Conserved Domains (2) summary
    PRK04301
    Location:1 → 296
    radA; DNA repair and recombination protein RadA; Validated
    cd19492
    Location:110 → 277
    Rad51C; RAD51C recombinase

  2. XM_038547929.1 → XP_038403857.1  DNA repair protein RAD51 homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LR27, A0A8C0PVY5, A0A8I3PM42, A0A8P0NJ31
    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

  3. XM_038547928.1 → XP_038403856.1  DNA repair protein RAD51 homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LR27, A0A8C0PVY5, A0A8I3PM42, A0A8P0NJ31
    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

  4. XM_038547927.1 → XP_038403855.1  DNA repair protein RAD51 homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LR27, A0A8C0PVY5, A0A8I3PM42, A0A8P0NJ31
    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

RNA

  1. XR_005364602.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32524483..32581843
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014116711.3 → XP_013972186.1  DNA repair protein RAD51 homolog 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PVY5
    Conserved Domains (2) summary
    PRK04301
    Location:1 → 296
    radA; DNA repair and recombination protein RadA; Validated
    cd19492
    Location:110 → 277
    Rad51C; RAD51C recombinase

  2. XM_022423223.2 → XP_022278931.1  DNA repair protein RAD51 homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LR27, A0A8C0PVY5, A0A8I3PM42, A0A8P0NJ31
    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

  3. XM_022423222.2 → XP_022278930.1  DNA repair protein RAD51 homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LR27, A0A8C0PVY5, A0A8I3PM42, A0A8P0NJ31
    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

  4. XM_014116710.3 → XP_013972185.1  DNA repair protein RAD51 homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LR27, A0A8C0PVY5, A0A8I3PM42, A0A8P0NJ31
    Conserved Domains (2) summary
    COG1066
    Location:61 → 133
    Sms; Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
    cd19492
    Location:110 → 321
    Rad51C; RAD51C recombinase

RNA

  1. XR_002630042.2 RNA Sequence

Nucleotide Protein
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