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PSMD12 proteasome 26S subunit, non-ATPase 12 [ Canis lupus familiaris (dog) ]

Gene ID: 480465, updated on 5-Mar-2024

Summary

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Official Symbol
PSMD12provided by VGNC
Official Full Name
proteasome 26S subunit, non-ATPase 12provided by VGNC
Primary source
VGNC:VGNC:45108
See related
Ensembl:ENSCAFG00845026964
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (14797042..14832573)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (14030779..14066155)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (13754296..13789691, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (13746700..13782148)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (13752964..13788312, complement)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene nucleolar protein 11 Neighboring gene phosphatidylinositol transfer protein cytoplasmic 1 Neighboring gene ELAV-like protein 1 Neighboring gene uncharacterized LOC111097528 Neighboring gene 40S ribosomal protein S10 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear proteasome complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle, lid subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome non-ATPase regulatory subunit 12
Names
proteasome (prosome, macropain) 26S subunit, non-ATPase, 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    14797042..14832573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038676062.1 → XP_038531990.1  26S proteasome non-ATPase regulatory subunit 12 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LQN2, A0A8C0T990, A0A8I3PZT2, A0A8I3PZW9, A0A8P0ND84
    Related
    ENSCAFP00845037335.1, ENSCAFT00845047579.1
    Conserved Domains (1) summary
    COG5071
    Location:14 → 456
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

  2. XM_038676063.1 → XP_038531991.1  26S proteasome non-ATPase regulatory subunit 12 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LLG6, A0A8I3PZW9, A0A8P0ND84
    Conserved Domains (1) summary
    COG5071
    Location:3 → 397
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    13746700..13782148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038485201.1 → XP_038341129.1  26S proteasome non-ATPase regulatory subunit 12 isoform X1

    Conserved Domains (1) summary
    COG5071
    Location:14 → 456
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

  2. XM_038485202.1 → XP_038341130.1  26S proteasome non-ATPase regulatory subunit 12 isoform X2

    Conserved Domains (1) summary
    COG5071
    Location:3 → 397
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    13752964..13788312 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038610806.1 → XP_038466734.1  26S proteasome non-ATPase regulatory subunit 12 isoform X1

    Conserved Domains (1) summary
    COG5071
    Location:14 → 456
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

  2. XM_038610807.1 → XP_038466735.1  26S proteasome non-ATPase regulatory subunit 12 isoform X2

    Conserved Domains (1) summary
    COG5071
    Location:3 → 397
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    13754296..13789691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038546818.1 → XP_038402746.1  26S proteasome non-ATPase regulatory subunit 12 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LQN2, A0A8C0T990, A0A8I3PZT2, A0A8I3PZW9, A0A8P0ND84
    Conserved Domains (1) summary
    COG5071
    Location:14 → 456
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

  2. XM_038546819.1 → XP_038402747.1  26S proteasome non-ATPase regulatory subunit 12 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LLG6, A0A8I3PZW9, A0A8P0ND84
    Conserved Domains (1) summary
    COG5071
    Location:3 → 397
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    14030779..14066155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_537584.6 → XP_537584.2  26S proteasome non-ATPase regulatory subunit 12 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LQN2, A0A8C0T990, A0A8I3PZT2, A0A8I3PZW9, A0A8P0ND84
    Conserved Domains (1) summary
    COG5071
    Location:14 → 456
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

  2. XM_022422854.2 → XP_022278562.1  26S proteasome non-ATPase regulatory subunit 12 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LLG6, A0A8I3PZW9, A0A8P0ND84
    Conserved Domains (1) summary
    COG5071
    Location:3 → 397
    RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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