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URB2 URB2 ribosome biogenesis homolog [ Canis lupus familiaris (dog) ]

Gene ID: 479207, updated on 5-Mar-2024

Summary

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Official Symbol
URB2provided by VGNC
Official Full Name
URB2 ribosome biogenesis homologprovided by VGNC
Primary source
VGNC:VGNC:57175
See related
Ensembl:ENSCAFG00845001297
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See URB2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (9648363..9676329, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (9608994..9636917, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (10018697..10046621, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (9651782..9679703, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (9766644..9794546, complement)

Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111095441 Neighboring gene uncharacterized LOC119871447 Neighboring gene uncharacterized LOC102152610 Neighboring gene TATA-box binding protein associated factor 5 like Neighboring gene ATP binding cassette subfamily B member 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
unhealthy ribosome biogenesis protein 2 homolog
Names
URB2 ribosome biogenesis 2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051808.1 Reference ROS_Cfam_1.0

    Range
    9648363..9676329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038662570.1 → XP_038518498.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0N7R5
    Conserved Domains (1) summary
    pfam10441
    Location:1393 → 1588
    Urb2; Urb2/Npa2 family

  2. XM_038662572.1 → XP_038518500.1  unhealthy ribosome biogenesis protein 2 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0N7R5, A0A8I3MH37
    Related
    ENSCAFP00845001780.1, ENSCAFT00845002247.1
    Conserved Domains (1) summary
    pfam10441
    Location:1319 → 1514
    Urb2; Urb2/Npa2 family

  3. XM_038662569.1 → XP_038518497.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0N7R5
    Conserved Domains (1) summary
    pfam10441
    Location:1393 → 1588
    Urb2; Urb2/Npa2 family

  4. XM_038662571.1 → XP_038518499.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0N7R5
    Conserved Domains (1) summary
    pfam10441
    Location:1393 → 1588
    Urb2; Urb2/Npa2 family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049264.1 Alternate UMICH_Zoey_3.1

    Range
    9651782..9679703 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038472919.1 → XP_038328847.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

  2. XM_038472921.1 → XP_038328849.1  unhealthy ribosome biogenesis protein 2 homolog isoform X2

  3. XM_038472918.1 → XP_038328846.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

  4. XM_038472920.1 → XP_038328848.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

    Range
    9766644..9794546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038598263.1 → XP_038454191.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

  2. XM_038598265.1 → XP_038454193.1  unhealthy ribosome biogenesis protein 2 homolog isoform X2

  3. XM_038598262.1 → XP_038454190.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

  4. XM_038598264.1 → XP_038454192.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

    Range
    10018697..10046621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038533945.1 → XP_038389873.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0N7R5

  2. XM_038533947.1 → XP_038389875.1  unhealthy ribosome biogenesis protein 2 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0N7R5, A0A8C0Q5J1, A0A8P0NEB6

  3. XM_038533944.1 → XP_038389872.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0N7R5

  4. XM_038533946.1 → XP_038389874.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0N7R5

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    9608994..9636917 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005618836.3 → XP_005618893.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

    See identical proteins and their annotated locations for XP_005618893.1

    UniProtKB/TrEMBL
    A0A8C0N7R5
    Conserved Domains (1) summary
    pfam10441
    Location:1393 → 1586
    Urb2; Urb2/Npa2 family

  2. XM_022417424.2 → XP_022273132.1  unhealthy ribosome biogenesis protein 2 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0N7R5, A0A8C0Q5J1, A0A8P0NEB6
    Conserved Domains (1) summary
    pfam10441
    Location:1319 → 1513
    Urb2; Urb2/Npa2 family

  3. XM_005618837.4 → XP_005618894.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

    See identical proteins and their annotated locations for XP_005618894.1

    UniProtKB/TrEMBL
    A0A8C0N7R5
    Conserved Domains (1) summary
    pfam10441
    Location:1393 → 1586
    Urb2; Urb2/Npa2 family

  4. XM_005618838.4 → XP_005618895.1  unhealthy ribosome biogenesis protein 2 homolog isoform X1

    See identical proteins and their annotated locations for XP_005618895.1

    UniProtKB/TrEMBL
    A0A8C0N7R5
    Conserved Domains (1) summary
    pfam10441
    Location:1393 → 1586
    Urb2; Urb2/Npa2 family
Nucleotide Protein
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