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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051837.1 Reference ROS_Cfam_1.0
- Range
-
12998286..13266737
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038444855.1 → XP_038300783.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038444854.1 → XP_038300782.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Related
- ENSCAFP00845032650.1, ENSCAFT00845041636.1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038444859.1 → XP_038300787.1 HMG box transcription factor BBX isoform X2
- UniProtKB/TrEMBL
-
A0A8C0T4H9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038444861.1 → XP_038300789.1 HMG box transcription factor BBX isoform X4
- UniProtKB/TrEMBL
- A0A8C0K6F6, A0A8C0NR74, A0A8C0T5C0
- Related
- ENSCAFP00845032541.1, ENSCAFT00845041507.1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038444862.1 → XP_038300790.1 HMG box transcription factor BBX isoform X5
- UniProtKB/TrEMBL
- A0A8C0K3H9, A0A8C0NXD6, A0A8C0T4I3, A0A8I3S3U1
- Related
- ENSCAFP00845032775.1, ENSCAFT00845041787.1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038444860.1 → XP_038300788.1 HMG box transcription factor BBX isoform X3
- UniProtKB/TrEMBL
- A0A8C0P5J4, A0A8I3PKC0, A0A8I3PP71, A0A8P0PF54
- Related
- ENSCAFP00845032961.1, ENSCAFT00845042025.1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 276
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038444857.1 → XP_038300785.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038444856.1 → XP_038300784.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038444858.1 → XP_038300786.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Related
- ENSCAFP00845033160.1, ENSCAFT00845042300.1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049293.1 Alternate UMICH_Zoey_3.1
- Range
-
12868445..13139431
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038519145.1 → XP_038375073.1 LOW QUALITY PROTEIN: HMG box transcription factor BBX isoform X1
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049774.1 Alternate UNSW_CanFamBas_1.0
- Range
-
12935044..13205312
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038647137.1 → XP_038503065.1 HMG box transcription factor BBX isoform X1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038647136.1 → XP_038503064.1 HMG box transcription factor BBX isoform X1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038647141.1 → XP_038503069.1 HMG box transcription factor BBX isoform X2
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038647143.1 → XP_038503071.1 HMG box transcription factor BBX isoform X4
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038647144.1 → XP_038503072.1 HMG box transcription factor BBX isoform X5
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038647142.1 → XP_038503070.1 HMG box transcription factor BBX isoform X3
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 276
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038647139.1 → XP_038503067.1 HMG box transcription factor BBX isoform X1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038647138.1 → XP_038503066.1 HMG box transcription factor BBX isoform X1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038647140.1 → XP_038503068.1 HMG box transcription factor BBX isoform X1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049254.1 Alternate UU_Cfam_GSD_1.0
- Range
-
13346521..13615301
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038582723.1 → XP_038438651.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038582722.1 → XP_038438650.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038582727.1 → XP_038438655.1 HMG box transcription factor BBX isoform X2
- UniProtKB/TrEMBL
-
A0A8C0T4H9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038582729.1 → XP_038438657.1 HMG box transcription factor BBX isoform X4
- UniProtKB/TrEMBL
- A0A8C0K6F6, A0A8C0NR74, A0A8C0T5C0
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038582730.1 → XP_038438658.1 HMG box transcription factor BBX isoform X5
- UniProtKB/TrEMBL
- A0A8C0K3H9, A0A8C0NXD6, A0A8C0T4I3, A0A8I3S3U1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038582728.1 → XP_038438656.1 HMG box transcription factor BBX isoform X3
- UniProtKB/TrEMBL
- A0A8C0P5J4, A0A8I3PKC0, A0A8I3PP71, A0A8P0PF54
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 276
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038582725.1 → XP_038438653.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038582724.1 → XP_038438652.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038582726.1 → XP_038438654.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006615.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
12938918..13207222
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005639461.3 → XP_005639518.1 HMG box transcription factor BBX isoform X1
See identical proteins and their annotated locations for XP_005639518.1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_005639459.3 → XP_005639516.1 HMG box transcription factor BBX isoform X1
See identical proteins and their annotated locations for XP_005639516.1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_005639463.3 → XP_005639520.1 HMG box transcription factor BBX isoform X2
- UniProtKB/TrEMBL
-
A0A8C0T4H9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_005639465.3 → XP_005639522.1 HMG box transcription factor BBX isoform X4
- UniProtKB/TrEMBL
- A0A8C0K6F6, A0A8C0NR74, A0A8C0T5C0
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_005639466.3 → XP_005639523.1 HMG box transcription factor BBX isoform X5
- UniProtKB/TrEMBL
- A0A8C0K3H9, A0A8C0NXD6, A0A8C0T4I3, A0A8I3S3U1
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_005639464.3 → XP_005639521.1 HMG box transcription factor BBX isoform X3
- UniProtKB/TrEMBL
- A0A8C0P5J4, A0A8I3PKC0, A0A8I3PP71, A0A8P0PF54
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 276
- DUF2028; Domain of unknown function (DUF2028)
-
XM_005639460.4 → XP_005639517.1 HMG box transcription factor BBX isoform X1
See identical proteins and their annotated locations for XP_005639517.1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_038462634.1 → XP_038318562.1 HMG box transcription factor BBX isoform X1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)
-
XM_005639462.4 → XP_005639519.1 HMG box transcription factor BBX isoform X1
See identical proteins and their annotated locations for XP_005639519.1
- UniProtKB/TrEMBL
- A0A8C0QXN3, A0A8C0T4H9, A0A8I3PEU5, A0A8P0NBY9
- Conserved Domains (2) summary
-
- cd01388
Location:78 → 149
- SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
- pfam09667
Location:190 → 303
- DUF2028; Domain of unknown function (DUF2028)