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RWDD2B RWD domain containing 2B [ Pan troglodytes (chimpanzee) ]

Gene ID: 473941, updated on 3-Apr-2024

Summary

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Official Symbol
RWDD2Bprovided by VGNC
Official Full Name
RWD domain containing 2Bprovided by VGNC
Primary source
VGNC:VGNC:1126
Locus tag
CK820_G0018191
See related
Ensembl:ENSPTRG00000013820
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 22 NC_072420.2 (29785978..29805285, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 21 NC_072419.1 (27418408..27437715, complement)

Chromosome 22 - NC_072420.2Genomic Context describing neighboring genes Neighboring gene listerin E3 ubiquitin protein ligase 1 Neighboring gene large ribosomal subunit protein uL14-like Neighboring gene uncharacterized LOC134809239 Neighboring gene uncharacterized LOC134809240 Neighboring gene ubiquitin specific peptidase 16 Neighboring gene chaperonin containing TCP1 subunit 8 Neighboring gene MAP3K7 C-terminal like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RWD domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001280165.1 → NP_001267094.1  RWD domain-containing protein 2B

    See identical proteins and their annotated locations for NP_001267094.1

    Status: PROVISIONAL

    Source sequence(s)
    AK307039
    UniProtKB/TrEMBL
    G2HJX5, H2QKW4
    Related
    ENSPTRP00000023807.4, ENSPTRT00000025793.4
    Conserved Domains (2) summary
    pfam05773
    Location:8 → 133
    RWD; RWD domain
    pfam06544
    Location:163 → 283
    DUF1115; Protein of unknown function (DUF1115)

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072420.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    29785978..29805285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009454420.4 → XP_009452695.3  RWD domain-containing protein 2B isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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