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GABRR1 gamma-aminobutyric acid type A receptor subunit rho1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 472068, updated on 29-Mar-2024

Summary

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Official Symbol
GABRR1provided by VGNC
Official Full Name
gamma-aminobutyric acid type A receptor subunit rho1provided by VGNC
Primary source
VGNC:VGNC:7889
Locus tag
CK820_G0000767
See related
Ensembl:ENSPTRG00000018417
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (101180219..101220542, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (101178702..101219003, complement)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene serine and arginine rich splicing factor 12 Neighboring gene uncharacterized LOC104006907 Neighboring gene peptidase M20 domain containing 2 Neighboring gene gamma-aminobutyric acid type A receptor subunit rho2 Neighboring gene tubulin beta-3 chain-like Neighboring gene ubiquitin conjugating enzyme E2 J1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GABA-A receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular ligand-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GABA-A receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-aminobutyric acid receptor subunit rho-1
Names
gamma-aminobutyric acid (GABA) A receptor, rho 1
gamma-aminobutyric acid (GABA) receptor, rho 1
gamma-aminobutyric acid type A receptor rho1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    101180219..101220542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063812544.1 → XP_063668614.1  gamma-aminobutyric acid receptor subunit rho-1 isoform X2

  2. XM_024357330.2 → XP_024213098.2  gamma-aminobutyric acid receptor subunit rho-1 isoform X1

  3. XM_063812545.1 → XP_063668615.1  gamma-aminobutyric acid receptor subunit rho-1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials
Miscellaneous