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HPF1 histone PARylation factor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 471347, updated on 29-Mar-2024

Summary

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Official Symbol
HPF1provided by VGNC
Official Full Name
histone PARylation factor 1provided by VGNC
Primary source
VGNC:VGNC:2941
Locus tag
CK820_G0018009
See related
Ensembl:ENSPTRG00000016590
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
C4H4orf27
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (171402495..171431099, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (171361895..171390458, complement)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene NIMA related kinase 1 Neighboring gene chloride voltage-gated channel 3 Neighboring gene uncharacterized LOC107974475 Neighboring gene prostaglandin E synthase 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly-ADP-D-ribose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein ADP-ribosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone PARylation factor 1
Names
UPF0609 protein C4orf27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    171402495..171431099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003954487.5 → XP_003954536.1  histone PARylation factor 1

    See identical proteins and their annotated locations for XP_003954536.1

    UniProtKB/TrEMBL
    A0A2J8MQS0, A0A6D2WDY3, H2QQF1, K7D190
    Related
    ENSPTRP00000028472.3
    Conserved Domains (1) summary
    pfam10228
    Location:79 → 328
    DUF2228; Uncharacterized conserved protein (DUF2228)
Nucleotide Protein
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