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FAM162A family with sequence similarity 162 member A [ Pan troglodytes (chimpanzee) ]

Gene ID: 470901, updated on 29-Mar-2024

Summary

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Official Symbol
FAM162Aprovided by VGNC
Official Full Name
family with sequence similarity 162 member Aprovided by VGNC
Primary source
VGNC:VGNC:6222
Locus tag
CK820_G0023937
See related
Ensembl:ENSPTRG00000015292
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (125659254..125685438)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (125568683..125594819)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene cystatin A Neighboring gene mitochondrial matrix import factor 23 Neighboring gene uncharacterized LOC134809472 Neighboring gene WD repeat domain 5B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of release of cytochrome c from mitochondria IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM162A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    125659254..125685438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016941747.3 → XP_016797236.1  protein FAM162A

    UniProtKB/TrEMBL
    A0A2I3SL71, A0A2J8M3T7, A0A6D2WS64, K7CLD5
    Related
    ENSPTRP00000066539.1
    Conserved Domains (1) summary
    pfam06388
    Location:33 → 152
    DUF1075; Protein of unknown function (DUF1075)
Nucleotide Protein
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