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PSMA8 proteasome 20S subunit alpha 8 [ Pan troglodytes (chimpanzee) ]

Gene ID: 468505, updated on 3-Apr-2024

Summary

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Official Symbol
PSMA8provided by VGNC
Official Full Name
proteasome 20S subunit alpha 8provided by VGNC
Primary source
VGNC:VGNC:5198
Locus tag
CK820_G0018656
See related
Ensembl:ENSPTRG00000009933
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 17 NC_072415.2 (35978663..36034628)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 18 NC_072416.1 (34900568..34960328)

Chromosome 17 - NC_072415.2Genomic Context describing neighboring genes Neighboring gene SS18 subunit of BAF chromatin remodeling complex Neighboring gene small ribosomal subunit protein eS24-like Neighboring gene uncharacterized LOC134808589 Neighboring gene SIN3-HDAC complex-associated factor-like Neighboring gene TATA-box binding protein associated factor 4b Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in proteasomal protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha-type 8
Names
proteasome (prosome, macropain) subunit, alpha type, 8
proteasome subunit alpha 8
XP_016788968.1
XP_054527672.1
XP_054527673.1
XP_523894.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072415.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    35978663..36034628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016933479.3 → XP_016788968.1  proteasome subunit alpha-type 8 isoform X1

    UniProtKB/TrEMBL
    A0A2I3TDV6, A0A2J8MPT9, A0A6D2XPM9, H2QED5
    Related
    ENSPTRP00000016894.4
    Conserved Domains (1) summary
    cd03755
    Location:5 → 219
    proteasome_alpha_type_7; proteasome_alpha_type_7. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on ...

  2. XM_523894.6 → XP_523894.2  proteasome subunit alpha-type 8 isoform X2

    See identical proteins and their annotated locations for XP_523894.2

    UniProtKB/TrEMBL
    A0A2I3TDV6, A0A2J8MPT2
    Related
    ENSPTRP00000087419.1
    Conserved Domains (1) summary
    cd03755
    Location:5 → 213
    proteasome_alpha_type_7; proteasome_alpha_type_7. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on ...

  3. XM_054671697.2 → XP_054527672.1  proteasome subunit alpha-type 8 isoform X3

  4. XM_054671698.2 → XP_054527673.1  proteasome subunit alpha-type 8 isoform X4

Nucleotide Protein
Heading Accession and Version

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