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CCDC87 coiled-coil domain containing 87 [ Pan troglodytes (chimpanzee) ]

Gene ID: 466681, updated on 29-Mar-2024

Summary

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Official Symbol
CCDC87provided by VGNC
Official Full Name
coiled-coil domain containing 87provided by VGNC
Primary source
VGNC:VGNC:3163
Locus tag
CK820_G0033864
See related
Ensembl:ENSPTRG00000003930
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CCDC87 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (68911568..68914729, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (68016813..68019941, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene actinin alpha 3 Neighboring gene cathepsin F Neighboring gene copper chaperone for superoxide dismutase Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 87

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    68911568..68914729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_522080.9 → XP_522080.2  coiled-coil domain-containing protein 87

    UniProtKB/TrEMBL
    A0A2J8QBA2, A0A6D2Y3L6, H2Q472
    Related
    ENSPTRP00000006774.3
    Conserved Domains (1) summary
    pfam03999
    Location:675 → 832
    MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)
Nucleotide Protein
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