Display Settings:

Format

Send to:

Choose Destination

HDAC8 histone deacetylase 8 [ Pan troglodytes (chimpanzee) ]

Gene ID: 465712, updated on 31-Jan-2015
Gene symbol
HDAC8
Gene description
histone deacetylase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
See HDAC8 in MapViewer
Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Pan_troglodytes-2.1.4 (GCF_000001515.6) X NC_006491.3 (72037955..72289103, complement)

Chromosome X - NC_006491.3Genomic Context describing neighboring genes Neighboring gene ribosomal protein S4, X-linked Neighboring gene Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 Neighboring gene phosphorylase kinase, alpha 1 (muscle) Neighboring gene F-actin-capping protein subunit alpha-1 pseudogene

Genomic Sequence:
NC_006491.3 Chromosome X Reference Pan_troglodytes-2.1.4 Primary Assembly

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Alcoholism, organism-specific biosystem (from KEGG)
    Alcoholism, organism-specific biosystemAlcoholism, also called dependence on alcohol (ethanol), is a chronic relapsing disorder that is progressive and has serious detrimental health outcomes. As one of the primary mediators of the reward...
  • Alcoholism, conserved biosystem (from KEGG)
    Alcoholism, conserved biosystemAlcoholism, also called dependence on alcohol (ethanol), is a chronic relapsing disorder that is progressive and has serious detrimental health outcomes. As one of the primary mediators of the reward...
  • Cell cycle, organism-specific biosystem (from WikiPathways)
    Cell cycle, organism-specific biosystem(From http://en.wikipedia.org/wiki/Cell_cycle) The cell cycle is the series of events that takes place in a cell leading to its division and duplication (replication). Regulation of the cell cycle in...
  • Viral carcinogenesis, organism-specific biosystem (from KEGG)
    Viral carcinogenesis, organism-specific biosystemThere is a strong association between viruses and the development of human malignancies. We now know that at least six human viruses, Epstein-Barr virus (EBV), hepatitis B virus (HBV), hepatitis C vi...
  • Viral carcinogenesis, conserved biosystem (from KEGG)
    Viral carcinogenesis, conserved biosystemThere is a strong association between viruses and the development of human malignancies. We now know that at least six human viruses, Epstein-Barr virus (EBV), hepatitis B virus (HBV), hepatitis C vi...

Markers

Homology

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 103

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pan_troglodytes-2.1.4 Primary Assembly

Genomic

  1. NC_006491.3 Reference Pan_troglodytes-2.1.4 Primary Assembly

    Range
    72037955..72289103
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009439270.1XP_009437545.1  

    Conserved Domains (1) summary
    cd10000
    Location:54389
    HDAC8; Histone deacetylase 8 (HDAC8)
  2. XM_009439269.1XP_009437544.1  

    Conserved Domains (1) summary
    cd10000
    Location:54383
    HDAC8; Histone deacetylase 8 (HDAC8)
  3. XM_009439272.1XP_009437547.1  

    Conserved Domains (1) summary
    cl17011
    Location:54292
    Arginase_HDAC; Arginase-like and histone-like hydrolases
  4. XM_009439268.1XP_009437543.1  

    Conserved Domains (1) summary
    cd10000
    Location:54383
    HDAC8; Histone deacetylase 8 (HDAC8)
  5. XM_009439271.1XP_009437546.1  

    Conserved Domains (1) summary
    cl17011
    Location:54315
    Arginase_HDAC; Arginase-like and histone-like hydrolases
  6. XM_003317520.2XP_003317568.1  

    See proteins identical to XP_003317568.1

    UniProtKB/TrEMBL
    K6ZI16
    Conserved Domains (1) summary
    cl17011
    Location:54185
    Arginase_HDAC; Arginase-like and histone-like hydrolases