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OSTF1 osteoclast stimulating factor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464532, updated on 29-Mar-2024

Summary

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Official Symbol
OSTF1provided by VGNC
Official Full Name
osteoclast stimulating factor 1provided by VGNC
Primary source
VGNC:VGNC:4818
Locus tag
CK820_G0017795
See related
Ensembl:ENSPTRG00000021031
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 11 NC_072409.2 (65580153..65638660)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 9 NC_072407.1 (53230056..53288640, complement)

Chromosome 11 - NC_072409.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129135938 Neighboring gene carnosine N-methyltransferase 1 Neighboring gene nicotinamide riboside kinase 1 Neighboring gene uncharacterized LOC134807663 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
osteoclast-stimulating factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    65580153..65638660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009456742.5 → XP_009455017.1  osteoclast-stimulating factor 1 isoform X2

    See identical proteins and their annotated locations for XP_009455017.1

    Conserved Domains (4) summary
    cd11772
    Location:19 → 71
    SH3_OSTF1; Src Homology 3 domain of metazoan osteoclast stimulating factor 1
    cd00204
    Location:78 → 177
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:80 → 167
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:79 → 106
    ANK; ANK repeat [structural motif]

  2. XM_009456741.5 → XP_009455016.1  osteoclast-stimulating factor 1 isoform X4

    See identical proteins and their annotated locations for XP_009455016.1

    Conserved Domains (3) summary
    cd11772
    Location:19 → 71
    SH3_OSTF1; Src Homology 3 domain of metazoan osteoclast stimulating factor 1
    cd00204
    Location:78 → 192
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:79 → 106
    ANK; ANK repeat [structural motif]

  3. XM_520078.8 → XP_520078.2  osteoclast-stimulating factor 1 isoform X1

    See identical proteins and their annotated locations for XP_520078.2

    UniProtKB/TrEMBL
    A0A2I3SS18, A0A2J8MRE1, A0A6D2WAS1
    Related
    ENSPTRP00000079818.1
    Conserved Domains (4) summary
    cd11772
    Location:16 → 68
    SH3_OSTF1; Src Homology 3 domain of metazoan osteoclast stimulating factor 1
    sd00045
    Location:76 → 103
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:77 → 170
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:144 → 198
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_063787778.1 → XP_063643848.1  osteoclast-stimulating factor 1 isoform X3

Nucleotide Protein
Heading Accession and Version

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