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    MYO1A myosin IA [ Homo sapiens (human) ]

    Gene ID: 4640, updated on 22-May-2013
    Official Symbol
    MYO1Aprovided by HGNC
    Official Full Name
    myosin IAprovided by HGNC
    Primary source
    HGNC:7595
    See related
    Ensembl:ENSG00000166866; HPRD:08371; MIM:601478; Vega:OTTHUMG00000149899
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    BBMI; MIHC; MYHL; DFNA48
    Summary
    This gene encodes a member of the myosin superfamily. The protein represents an unconventional myosin; it should not be confused with the conventional skeletal muscle myosin-1 (MYH1). Unconventional myosins contain the basic domains characteristic of conventional myosins and are further distinguished from class members by their tail domains. They function as actin-based molecular motors. Mutations in this gene have been associated with autosomal dominant deafness. Alternatively spliced variants have been found for this gene. [provided by RefSeq, Dec 2011]
    Location :
    12q13-q14
    Sequence :
    Chromosome: 12; NC_000012.11 (57422301..57444549, complement)
    See MYO1A in Epigenomics, MapViewer

    Chromosome 12 - NC_000012.11Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 39 Neighboring gene tachykinin 3 Neighboring gene transmembrane protein 194A Neighboring gene NGFI-A binding protein 2 (EGR1 binding protein 2) Neighboring gene signal transducer and activator of transcription 6, interleukin-4 induced

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Deafness, autosomal dominant 48

    Summary from GeneReviews: Deafness and Hereditary Hearing Loss Overview Go to GeneReviews

    Disease Characteristics
    Hereditary hearing loss and deafness may be conductive, sensorineural, or a combination of both; syndromic (associated with malformations of the external ear or other organs or with medical problems involving other organ systems) or nonsyndromic (no associated visible abnormalities of the external ear or any related medical problems); and prelingual (before language develops) or postlingual (after language develops).
    Diagnosis Testing
    Genetic forms of hearing loss must be distinguished from acquired (non-genetic) causes of hearing loss. The genetic forms of hearing loss are diagnosed by otologic, audiologic, and physical examination, family history, ancillary testing (e.g., CT examination of the temporal bone), and molecular genetic testing. Molecular genetic testing, available in clinical laboratories for many types of syndromic and nonsyndromic deafness, plays a prominent role in diagnosis and genetic counseling.
    Genetic Counseling
    Hereditary hearing loss can be inherited in an autosomal dominant, autosomal recessive, or X-linked recessive manner, as well as by mitochondrial inheritance. Genetic counseling and risk assessment depend on accurate determination of the specific genetic diagnosis. In the absence of a specific diagnosis, empiric recurrence risk figures, coupled with GJB2 and GJB6 molecular genetic testing results, can be used for genetic counseling.
    References
    Products Interactant Other Gene Complex Source Pubs Description
    Q9UBC5 P63261 ACTG1    HPRD  PubMed  
    BioGRID:110724 BioGRID:107664 CNN1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:110724 BioGRID:114032 CUL1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:110724 BioGRID:118061 DISC1    BioGRID  PubMed Two-hybrid 
    BioGRID:110724 BioGRID:117646 FBXO25    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:110724 BioGRID:116077 USP20    BioGRID  PubMed Affinity Capture-MS 

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    motor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    microvillus assembly IEA
    Inferred from Electronic Annotation
    more info
     
    sensory perception of sound IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    vesicle localization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    basal plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    basolateral plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    brush border IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cortical actin cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    filamentous actin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    lateral plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    microvillus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    myosin complex IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    unconventional myosin-Ia
    Names
    unconventional myosin-Ia
    myosin I heavy chain
    brush border myosin I
    myosin, heavy polypeptide-like (100kD)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_012104.1 RefSeqGene

      Range
      4345..26593
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001256041.1NP_001242970.1  unconventional myosin-Ia

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
      Source sequence(s)
      AF105424, AK312431, D25786
      Consensus CDS
      CCDS8929.1
      UniProtKB/TrEMBL
      B2R643
      UniProtKB/Swiss-Prot
      Q9UBC5
      Related
      ENSP00000393392, OTTHUMP00000195074, ENST00000442789, OTTHUMT00000313833
      Conserved Domains (4) summary
      cd01378
      Location:26691
      Blast Score: 2599
      MYSc_type_I; Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This ...
      pfam06017
      Location:8461043
      Blast Score: 460
      Myosin_TH1; Myosin tail
      smart00015
      Location:742764
      Blast Score: 92
      IQ; Calmodulin-binding motif.
      smart00242
      Location:27691
      Blast Score: 2481
      MYSc; Myosin. Large ATPases.
    2. NM_005379.3NP_005370.1  unconventional myosin-Ia

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
      Source sequence(s)
      BC059387, D25786
      Consensus CDS
      CCDS8929.1
      UniProtKB/Swiss-Prot
      Q9UBC5
      Related
      ENSP00000300119, OTTHUMP00000195072, ENST00000300119, OTTHUMT00000313830
      Conserved Domains (4) summary
      cd01378
      Location:26691
      Blast Score: 2599
      MYSc_type_I; Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This ...
      pfam06017
      Location:8461043
      Blast Score: 460
      Myosin_TH1; Myosin tail
      smart00015
      Location:742764
      Blast Score: 92
      IQ; Calmodulin-binding motif.
      smart00242
      Location:27691
      Blast Score: 2481
      MYSc; Myosin. Large ATPases.

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000012.11 Reference GRCh37.p10 Primary Assembly

      Range
      57422301..57444549, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000144.1 Alternate HuRef

      Range
      54460846..54483094, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018923.1 Alternate CHM1_1.0

      Range
      57256059..57278308, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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