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RNF217 ring finger protein 217 [ Pan troglodytes (chimpanzee) ]

Gene ID: 462979, updated on 29-Mar-2024

Summary

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Official Symbol
RNF217provided by VGNC
Official Full Name
ring finger protein 217provided by VGNC
Primary source
VGNC:VGNC:11213
Locus tag
CK820_G0000369
See related
Ensembl:ENSPTRG00000018571
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
IBRDC1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (136839842..136969409)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (136838913..136967893)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene triadin Neighboring gene uncharacterized LOC107975292 Neighboring gene sodium/potassium transporting ATPase interacting 2 Neighboring gene PHD finger protein 5A pseudogene Neighboring gene uncharacterized LOC104006968 Neighboring gene TPD52 like 1 Neighboring gene HD domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable E3 ubiquitin-protein ligase RNF217; E3 ubiquitin-protein ligase RNF217
Names
IBR domain containing 1
XP_054542894.1
XP_054542895.1
XP_518723.7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    136839842..136969409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054686919.2 → XP_054542894.1  E3 ubiquitin-protein ligase RNF217 isoform X2

  2. XM_054686920.2 → XP_054542895.1  E3 ubiquitin-protein ligase RNF217 isoform X3

  3. XM_518723.8 → XP_518723.7  E3 ubiquitin-protein ligase RNF217 isoform X1

Nucleotide Protein
Heading Accession and Version

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