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MDN1 midasin AAA ATPase 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 462886, updated on 29-Mar-2024

Summary

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Official Symbol
MDN1provided by VGNC
Official Full Name
midasin AAA ATPase 1provided by VGNC
Primary source
VGNC:VGNC:3464
Locus tag
CK820_G0000754
See related
Ensembl:ENSPTRG00000018423
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
105
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (101637209..101825865, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (101635692..101822734, complement)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 6 Neighboring gene uncharacterized LOC134810212 Neighboring gene LYR motif containing 2 Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-like Neighboring gene protein PIMREG-like Neighboring gene small nucleolar RNA U13 Neighboring gene caspase 8 associated protein 2 Neighboring gene large ribosomal subunit protein eL22-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
midasin
Names
MDN1, midasin homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    101637209..101825865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054686835.2 → XP_054542810.1  midasin isoform X3

  2. XM_016955994.4 → XP_016811483.2  midasin isoform X1

  3. XM_063812547.1 → XP_063668617.1  midasin isoform X2

  4. XM_063812548.1 → XP_063668618.1  midasin isoform X4

  5. XM_063812549.1 → XP_063668619.1  midasin isoform X5

  6. XM_063812550.1 → XP_063668620.1  midasin isoform X6

RNA

  1. XR_001718579.4 RNA Sequence

  2. XR_010157740.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials
Miscellaneous