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FRAS1 Fraser extracellular matrix complex subunit 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 461226, updated on 29-Mar-2024

Summary

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Official Symbol
FRAS1provided by VGNC
Official Full Name
Fraser extracellular matrix complex subunit 1provided by VGNC
Primary source
VGNC:VGNC:2079
Locus tag
CK820_G0003569
See related
Ensembl:ENSPTRG00000016200
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
74
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (51594220..52074779, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (51594196..52075640, complement)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene annexin A3 Neighboring gene SERPINE1 mRNA-binding protein 1-like Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene serine/arginine-rich splicing factor 10-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular matrix protein FRAS1; extracellular matrix organizing protein FRAS1
Names
Fraser syndrome 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    51594220..52074779 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_517202.8 → XP_517202.4  extracellular matrix organizing protein FRAS1 isoform X1

  2. XM_063808847.1 → XP_063664917.1  extracellular matrix organizing protein FRAS1 isoform X4

  3. XM_024356095.3 → XP_024211863.2  extracellular matrix organizing protein FRAS1 isoform X2

  4. XM_024356096.3 → XP_024211864.2  extracellular matrix organizing protein FRAS1 isoform X3

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials
Miscellaneous