These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_012330.1 RefSeqGene
- Range
- 5001..42859
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001130172.1 → NP_001123644.1 transcriptional activator Myb isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an internal segment and an exon in the coding region, as compared to variant 1. The reading frame is not affected, so the resulting isoform (3) lacks two internal segments, as compared to isoform 1.
- Source sequence(s)
-
AJ606320, D25774
- Consensus CDS
-
CCDS47482.1
- UniProtKB/Swiss-Prot
-
P10242
- Related
- ENSP00000410825, OTTHUMP00000234321, ENST00000442647, OTTHUMT00000391709
- Conserved Domains (4) summary
-
- cd00167
Location:94 – 138
Blast Score: 162
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- pfam07988
Location:266 – 313
Blast Score: 146
- LMSTEN; LMSTEN motif
- smart00717
Location:92 – 140
Blast Score: 183
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam09316
Location:399 – 564
Blast Score: 640
- Cmyb_C; C-myb, C-terminal
-
NM_001130173.1 → NP_001123645.1 transcriptional activator Myb isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AJ606319, D25774
- Consensus CDS
-
CCDS47481.1
- UniProtKB/Swiss-Prot
-
P10242
- Related
- ENSP00000339992, OTTHUMP00000017259, ENST00000341911, OTTHUMT00000042348
- Conserved Domains (4) summary
-
- cd00167
Location:94 – 138
Blast Score: 166
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- pfam07988
Location:266 – 313
Blast Score: 147
- LMSTEN; LMSTEN motif
- smart00717
Location:92 – 140
Blast Score: 186
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam09316
Location:518 – 688
Blast Score: 658
- Cmyb_C; C-myb, C-terminal
-
NM_001161656.1 → NP_001155128.1 transcriptional activator Myb isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the coding region compared to variant 1. This results in a shorter protein (isoform 4) compared to isoform 1.
- Source sequence(s)
-
AL023693
- Consensus CDS
-
CCDS55058.1
- UniProtKB/TrEMBL
-
E9PNL6
- Related
- ENSP00000434723, OTTHUMP00000234431, ENST00000528774, OTTHUMT00000391902
- Conserved Domains (4) summary
-
- cd00167
Location:94 – 138
Blast Score: 166
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- pfam07988
Location:266 – 313
Blast Score: 147
- LMSTEN; LMSTEN motif
- smart00717
Location:92 – 140
Blast Score: 186
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam09316
Location:515 – 685
Blast Score: 659
- Cmyb_C; C-myb, C-terminal
-
NM_001161657.1 → NP_001155129.1 transcriptional activator Myb isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks two alternate in-frame segments in the coding region, as compared to variant 1. This variant encodes isoform 5, which is shorter than isoform 1.
- Source sequence(s)
-
AL023693
- Consensus CDS
-
CCDS55061.1
- UniProtKB/TrEMBL
-
E9PRS2
- Related
- ENSP00000435938, OTTHUMP00000234322, ENST00000525369, OTTHUMT00000391710
- Conserved Domains (4) summary
-
- cd00167
Location:94 – 138
Blast Score: 159
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- pfam07988
Location:266 – 313
Blast Score: 144
- LMSTEN; LMSTEN motif
- smart00717
Location:92 – 140
Blast Score: 180
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam09316
Location:317 – 482
Blast Score: 641
- Cmyb_C; C-myb, C-terminal
-
NM_001161658.1 → NP_001155130.1 transcriptional activator Myb isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) uses an alternate in-frame splice site in the coding region compared to variant 1. This results in a shorter protein (isoform 6) compared to isoform 1.
- Source sequence(s)
-
AL023693
- Consensus CDS
-
CCDS55059.1
- UniProtKB/TrEMBL
-
E9PNA4
- Related
- ENSP00000432851, OTTHUMP00000234432, ENST00000534121, OTTHUMT00000391903
- Conserved Domains (4) summary
-
- cd00167
Location:94 – 138
Blast Score: 166
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- pfam07988
Location:266 – 313
Blast Score: 148
- LMSTEN; LMSTEN motif
- smart00717
Location:92 – 140
Blast Score: 186
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam09316
Location:502 – 672
Blast Score: 658
- Cmyb_C; C-myb, C-terminal
-
NM_001161659.1 → NP_001155131.1 transcriptional activator Myb isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks two alternate in-frame segments in the coding region, as compared to variant 1. This variant encodes isoform 7, which is shorter than isoform 1.
- Source sequence(s)
-
AL023693
- Consensus CDS
-
CCDS55060.1
- UniProtKB/TrEMBL
-
E9PLZ5
- Related
- ENSP00000435055, OTTHUMP00000234392, ENST00000534044, OTTHUMT00000391844
- Conserved Domains (4) summary
-
- cd00167
Location:94 – 138
Blast Score: 162
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- pfam07988
Location:266 – 313
Blast Score: 145
- LMSTEN; LMSTEN motif
- smart00717
Location:92 – 140
Blast Score: 182
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam09316
Location:402 – 594
Blast Score: 520
- Cmyb_C; C-myb, C-terminal
-
NM_001161660.1 → NP_001155132.1 transcriptional activator Myb isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) lacks two alternate in-frame segments in the coding region, as compared to variant 1. This variant encodes isoform 8, which is shorter than isoform 1.
- Source sequence(s)
-
AL023693
- Consensus CDS
-
CCDS55062.1
- UniProtKB/TrEMBL
-
E9PI07
- Related
- ENSP00000436605, OTTHUMP00000234393, ENST00000533624, OTTHUMT00000391846
- Conserved Domains (3) summary
-
- cd00167
Location:94 – 138
Blast Score: 163
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- smart00717
Location:92 – 140
Blast Score: 183
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam09316
Location:367 – 532
Blast Score: 641
- Cmyb_C; C-myb, C-terminal
-
NM_005375.2 → NP_005366.2 transcriptional activator Myb isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the coding region, as compared to variant 1. The resulting isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
BC035996, BC064955, X52125, X52126
- Consensus CDS
-
CCDS5174.1
- UniProtKB/Swiss-Prot
-
P10242
- UniProtKB/TrEMBL
-
Q14025
- UniProtKB/TrEMBL
-
Q708E9
- Related
- ENSP00000356788, OTTHUMP00000017258, ENST00000367814, OTTHUMT00000042347
- Conserved Domains (4) summary
-
- cd00167
Location:94 – 138
Blast Score: 163
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- pfam07988
Location:266 – 313
Blast Score: 146
- LMSTEN; LMSTEN motif
- smart00717
Location:92 – 140
Blast Score: 183
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam09316
Location:402 – 567
Blast Score: 639
- Cmyb_C; C-myb, C-terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000006.11 Reference GRCh37.p5 Primary Assembly
- Range
- 135502453..135540311
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000138.1 Alternate HuRef
- Range
- 133066684..133104587
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)