These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_016016.1 RefSeqGene
- Range
- 5001..137228
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001166280.1 → NP_001159752.1 muscle, skeletal receptor tyrosine-protein kinase isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an alternate in-frame exon and lacks an alternate in-frame exon in the middle portion of the coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AF006464, BC109098, BG825304
- UniProtKB/Swiss-Prot
-
O15146
- Related
- ENSP00000363570, ENST00000374447
- Conserved Domains (6) summary
-
- cd05050
Location:483 – 772
Blast Score: 1571
- PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
- cd00096
Location:239 – 300
Blast Score: 129
- Ig; Immunoglobulin domain
- pfam07679
Location:121 – 199
Blast Score: 275
- I-set; Immunoglobulin I-set domain
- pfam07714
Location:489 – 770
Blast Score: 1009
- Pkinase_Tyr; Protein tyrosine kinase
- cl02447
Location:317 – 379
Blast Score: 249
- CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
- cl11960
Location:135 – 199
Blast Score: 192
- Ig; Immunoglobulin domain
-
NM_001166281.1 → NP_001159753.1 muscle, skeletal receptor tyrosine-protein kinase isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon in the middle portion of the coding region compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
- Source sequence(s)
-
AF006464, BC109099, BG825304
- UniProtKB/Swiss-Prot
-
O15146
- Conserved Domains (6) summary
-
- cd05050
Location:473 – 762
Blast Score: 1571
- PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
- cd00096
Location:229 – 290
Blast Score: 129
- Ig; Immunoglobulin domain
- pfam07679
Location:121 – 208
Blast Score: 282
- I-set; Immunoglobulin I-set domain
- pfam07714
Location:479 – 760
Blast Score: 1008
- Pkinase_Tyr; Protein tyrosine kinase
- cl02447
Location:307 – 369
Blast Score: 249
- CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
- cl11960
Location:135 – 201
Blast Score: 194
- Ig; Immunoglobulin domain
-
NM_005592.3 → NP_005583.1 muscle, skeletal receptor tyrosine-protein kinase isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AF006464, BC109099, BG825304
- Consensus CDS
-
CCDS48005.1
- UniProtKB/Swiss-Prot
-
O15146
- Related
- ENSP00000363571, ENST00000374448
- Conserved Domains (6) summary
-
- cd05050
Location:569 – 858
Blast Score: 1570
- PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
- cd00096
Location:229 – 290
Blast Score: 128
- Ig; Immunoglobulin domain
- pfam07679
Location:121 – 208
Blast Score: 281
- I-set; Immunoglobulin I-set domain
- pfam07714
Location:575 – 856
Blast Score: 1010
- Pkinase_Tyr; Protein tyrosine kinase
- cl02447
Location:315 – 457
Blast Score: 596
- CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
- cl11960
Location:135 – 201
Blast Score: 193
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000009.11 Reference GRCh37.p5 Primary Assembly
- Range
- 113431051..113563278
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000141.1 Alternate HuRef
- Range
- 83032852..83161644
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)