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    MUSK muscle, skeletal, receptor tyrosine kinase [ Homo sapiens ]

    Gene ID: 4593, updated on 11-May-2012

    Summary

    Official Symbol
    MUSKprovided by HGNC
    Official Full Name
    muscle, skeletal, receptor tyrosine kinaseprovided by HGNC
    Primary source
    HGNC:7525
    Locus tag
    RP11-104M22.1
    See related
    Ensembl:ENSG00000030304; HPRD:03190; MIM:601296; Vega:OTTHUMG00000020485
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MGC126323; MGC126324
    Summary
    This gene encodes a muscle-specific tyrosine kinase receptor. The encoded protein may play a role in clustering of the acetylcholine receptor in the postsynaptic neuromuscular junction. Mutations in this gene have been associated with congenital myasthenic syndrome. Alternatively spliced transcript variants have been described.[provided by RefSeq, Oct 2009]

    Genomic context

    Location :
    9q31.3-q32
    Sequence :
    Chromosome: 9; NC_000009.11 (113431051..113563278)
    See MUSK in Epigenomics, MapViewer

    Chromosome 9 - NC_000009.11Genomic Context describing neighboring genes Neighboring gene thioredoxin domain containing 8 (spermatozoa) Neighboring gene sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 Neighboring gene ribosomal protein S21 pseudogene 5 Neighboring gene lysophosphatidic acid receptor 1 Neighboring gene uncharacterized LOC100288449 Neighboring gene RNA, Ro-associated Y4 pseudogene 18

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    O15146 Q9Y215 COLQ    HPRD  PubMed  
    O15146 Q18PE1 DOK7    HPRD  PubMed  
    O15146 Q13702 RAPSN    HPRD  PubMed  
    O15146 Q8NF91 SYNE1    HPRD  PubMed  
    BioGRID:110679 BioGRID:110815 NEDD8    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:110679 BioGRID:116664 PDZRN3    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:110679 BioGRID:116928 SYNE1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:110679 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-Western 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    PDZ domain binding IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein tyrosine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    transmembrane receptor protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    memory ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    multicellular organismal development IEA
    Inferred from Electronic Annotation
    more info
     
    neuromuscular junction development ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of gene expression ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of neuron apoptosis IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of protein geranylgeranylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of protein phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    protein autophosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    regulation of synaptic growth at neuromuscular junction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    regulation of transcription, DNA-dependent IEA
    Inferred from Electronic Annotation
    more info
     
    skeletal muscle acetylcholine-gated channel clustering ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    transmembrane receptor protein tyrosine kinase signaling pathway TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    integral to plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    neuromuscular junction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    postsynaptic membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    muscle, skeletal receptor tyrosine-protein kinase
    Names
    muscle, skeletal receptor tyrosine-protein kinase
    muscle-specific kinase receptor
    muscle-specific tyrosine-protein kinase receptor
    NP_001159752.1
    NP_001159753.1
    NP_005583.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_016016.1 RefSeqGene

      Range
      5001..137228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001166280.1NP_001159752.1  muscle, skeletal receptor tyrosine-protein kinase isoform 2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) contains an alternate in-frame exon and lacks an alternate in-frame exon in the middle portion of the coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
      Source sequence(s)
      AF006464, BC109098, BG825304
      UniProtKB/Swiss-Prot
      O15146
      Related
      ENSP00000363570, ENST00000374447
      Conserved Domains (6) summary
      cd05050
      Location:483772
      Blast Score: 1571
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:239300
      Blast Score: 129
      Ig; Immunoglobulin domain
      pfam07679
      Location:121199
      Blast Score: 275
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:489770
      Blast Score: 1009
      Pkinase_Tyr; Protein tyrosine kinase
      cl02447
      Location:317379
      Blast Score: 249
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cl11960
      Location:135199
      Blast Score: 192
      Ig; Immunoglobulin domain
    2. NM_001166281.1NP_001159753.1  muscle, skeletal receptor tyrosine-protein kinase isoform 3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) lacks an alternate in-frame exon in the middle portion of the coding region compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
      Source sequence(s)
      AF006464, BC109099, BG825304
      UniProtKB/Swiss-Prot
      O15146
      Conserved Domains (6) summary
      cd05050
      Location:473762
      Blast Score: 1571
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:229290
      Blast Score: 129
      Ig; Immunoglobulin domain
      pfam07679
      Location:121208
      Blast Score: 282
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:479760
      Blast Score: 1008
      Pkinase_Tyr; Protein tyrosine kinase
      cl02447
      Location:307369
      Blast Score: 249
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cl11960
      Location:135201
      Blast Score: 194
      Ig; Immunoglobulin domain
    3. NM_005592.3NP_005583.1  muscle, skeletal receptor tyrosine-protein kinase isoform 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AF006464, BC109099, BG825304
      Consensus CDS
      CCDS48005.1
      UniProtKB/Swiss-Prot
      O15146
      Related
      ENSP00000363571, ENST00000374448
      Conserved Domains (6) summary
      cd05050
      Location:569858
      Blast Score: 1570
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:229290
      Blast Score: 128
      Ig; Immunoglobulin domain
      pfam07679
      Location:121208
      Blast Score: 281
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:575856
      Blast Score: 1010
      Pkinase_Tyr; Protein tyrosine kinase
      cl02447
      Location:315457
      Blast Score: 596
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cl11960
      Location:135201
      Blast Score: 193
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000009.11 Reference GRCh37.p5 Primary Assembly

      Range
      113431051..113563278
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000141.1 Alternate HuRef

      Range
      83032852..83161644
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AL157881.14 CAH69976.1
      CAH69977.1
      CAH69978.1
    genomic AL513328.12 CAI17349.1
      CAI17350.1
      CAI17351.1
    genomic CH471105.1 EAW59065.1
      EAW59066.1
      EAW59067.1
    mRNA AA448972.1 None
    mRNA AF006464.1 AAB63044.1
    mRNA BC109098.1 AAI09099.1
    mRNA BC109099.1 AAI09100.1
    mRNA BG825304.1 None
    mRNA Z25436.1 CAA80923.1
    other-genetic EU832778.1 ACE87789.1
    other-genetic EU832779.1 ACE87790.1
    other-genetic GQ129313.1 ACT64447.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    O15146.1 GenPept UniProtKB/Swiss-Prot:O15146
    Q15457 GenPept UniProtKB/TrEMBL:Q15457

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