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OSR1 odd-skipped related transcription factor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 459047, updated on 29-Mar-2024

Summary

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Official Symbol
OSR1provided by VGNC
Official Full Name
odd-skipped related transcription factor 1provided by VGNC
Primary source
VGNC:VGNC:330
Locus tag
CK820_G0009699
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2A
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (103523109..103529787)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (19316630..19330124, complement)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107971540 Neighboring gene uncharacterized LOC129143097 Neighboring gene uncharacterized LOC134807943 Neighboring gene uncharacterized LOC134807944 Neighboring gene uncharacterized LOC134807945 Neighboring gene U6 spliceosomal RNA Neighboring gene 5'-nucleotidase, cytosolic IB

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryo development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in urogenital system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein odd-skipped-related 1; LOW QUALITY PROTEIN: protein odd-skipped-related 1
Names
odd-skipped related 1
odd-skipped related transciption factor 1
XP_001137836.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    103523109..103529787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001137836.6 → XP_001137836.2  LOW QUALITY PROTEIN: protein odd-skipped-related 1

    Conserved Domains (3) summary
    sd00017
    Location:177 → 197
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:175 → 197
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:189 → 214
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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