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    Rmag_0240 NADH dehydrogenase subunit D [ Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) ]

    Gene ID: 4554911, updated on 18-May-2013
    Gene symbol
    Rmag_0240
    Gene description
    NADH dehydrogenase subunit D
    Locus tag
    Rmag_0240
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) (strain: Cm)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts
    Sequence :
    NC_008610.1 (253483..254736)

    NC_008610.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase subunit B Neighboring gene NADH (or F420H2) dehydrogenase, subunit C Neighboring gene NADH-quinone oxidoreductase, E subunit Neighboring gene NADH-quinone oxidoreductase, F subunit Neighboring gene NADH-quinone oxidoreductase, chain G Neighboring gene respiratory-chain NADH dehydrogenase, subunit 1

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. The Calyptogena magnifica chemoautotrophic symbiont genome. Newton IL, et al. Science, 2007 Feb 16. PMID 17303757.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    NADH dehydrogenase subunit D
    YP_903493.1
    • Catalyzes the transfer of electrons from NADH to quinone

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_008610.1

      Range
      253483..254736
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_903493.1 NADH dehydrogenase subunit D [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)]

      Status: VALIDATED

      UniProtKB/Swiss-Prot
      A1AVR5
      Conserved Domains (2) summary
      PRK06075
      Location:1 – 417
      Blast Score: 1958
      PRK06075; NADH dehydrogenase subunit D; Validated
      COG0649
      Location:1 – 417
      Blast Score: 1649
      NuoD; NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Energy production and conversion]
    Nucleotide Protein
    Heading Accession and Version
    genomic CP000488.1 ABL02022.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1AVR5.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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