PCGF2 polycomb group ring finger 2 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: PCGF2provided by VGNC
Official Full Name: polycomb group ring finger 2provided by VGNC
Primary source: VGNC:VGNC:12594
Locus tag: CK820_G0039204
See related: Ensembl:ENSPTRG00000009074
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	19	NC_072417.2 (29344543..29360486)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	17	NC_072415.1 (27529392..27544945)

Chromosome 19 - NC_072417.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH91451 (e-PCR)
- UniSTS:92439

RH17373 (e-PCR)
- UniSTS:49506

RH78331 (e-PCR)
- UniSTS:51057

SHGC-82631 (e-PCR)
- UniSTS:95616

D17S518 (e-PCR)
- UniSTS:146842

RH12584 (e-PCR)
- UniSTS:15264

G73130 (e-PCR)
- UniSTS:231378

MARC_5495-5496:996690465:1 (e-PCR)
- UniSTS:231378

A007D13 (e-PCR)
- UniSTS:19452

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables promoter-specific chromatin binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in negative regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of PRC1 complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: polycomb group RING finger protein 2

Names: ring finger protein 110

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

29344543..29360486

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_063798633.1 → XP_063654703.1 polycomb group RING finger protein 2

UniProtKB/TrEMBL

A0A2J8KH96, A0A6D2XG45, H2QCT2
XM_054671608.2 → XP_054527583.1 polycomb group RING finger protein 2

UniProtKB/TrEMBL

A0A2J8KH96, A0A6D2XG45, H2QCT2
XM_063798634.1 → XP_063654704.1 polycomb group RING finger protein 2

UniProtKB/TrEMBL

A0A2J8KH96, A0A6D2XG45, H2QCT2
XM_063798632.1 → XP_063654702.1 polycomb group RING finger protein 2

UniProtKB/TrEMBL

A0A2J8KH96, A0A6D2XG45, H2QCT2
XM_063798631.1 → XP_063654701.1 polycomb group RING finger protein 2

UniProtKB/TrEMBL

A0A2J8KH96, A0A6D2XG45, H2QCT2
XM_016931888.4 → XP_016787377.1 polycomb group RING finger protein 2

UniProtKB/TrEMBL

A0A2J8KH96, A0A2J8KHB6, A0A6D2XG45, H2QCT2

Related

ENSPTRP00000015465.4

Conserved Domains (3) summary

PLN02217
Location:236 → 328

PLN02217; probable pectinesterase/pectinesterase inhibitor

cd16736
Location:12 → 65

RING-HC_PCGF4; RING finger found in polycomb group RING finger protein 4 (PCGF4) and similar proteins

cd17164
Location:130 → 228

RAWUL_PCGF2; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 2 (PCGF2)