E5 [Drosophila melanogaster] - Gene

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Summary

Official Symbol: E5provided by Flybase
Primary source: FLYBASE:FBgn0008646
Locus tag: Dmel_CG9930
Gene type: protein coding
RNA name: E5
RefSeq status: REVIEWED
Organism: Drosophila melanogaster
Lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as: CG9930; Dmel\CG9930

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Genomic context

Location :: 88A1-88A1

Sequence :: Chromosome: 3R; NT_033777.2 (9693067..9700638, complement)

See E5 in Epigenomics, MapViewer

Chromosome 3R - NT_033777.2 Genomic Context describing neighboring genes

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Genomic regions, transcripts, and products

Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

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Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

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Interactions

Products	Interactant	Other Gene	Source	Pubs	Description
BioGRID:69651	BioGRID:67008	Akt1	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:64801	Atg1	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:58714	CG10992	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:62986	CG11110	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:64417	CG13309	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:57607	CG3708	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:59556	CG4896	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:62285	CG6337	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:62961	CG8929	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:60341	CG9573	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:63358	CG9850	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:62461	Cdk5	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:64701	CycA	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:58898	CycD	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:68567	CycG	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:63921	CycJ	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:61464	Dpit47	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:65899	MTA1-like	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:69024	RFeSP	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:65629	SAK	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:67396	Sirt2	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:67232	Vha100-2	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:59659	dpp	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:60297	fu2	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:61001	grp	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:64251	lark	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:70663	mus205	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:68673	nej	BioGRID	PubMed	Two-hybrid
BioGRID:69651	BioGRID:77769	squ	BioGRID	PubMed	Two-hybrid

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General gene information

Homology

Homologs of the E5 gene: The E5 gene is conserved in human, cow, mouse, rat, and zebrafish.

Gene Ontology Provided by FlyBase

Function	Evidence Code	Pubs
sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info
sequence-specific DNA binding transcription factor activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
regulation of transcription, DNA-dependent	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
nucleus	ISS Inferred from Sequence or Structural Similarity more info

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General protein information

Preferred Names: CG9930 gene product from transcript CG9930-RA

Names: CG9930-PA; E5; E5-PA

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NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NT_033777.2

Range

9693067..9700638, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_080086.2 → NP_524825.1 E5 [Drosophila melanogaster]

Status: REVIEWED

UniProtKB/TrEMBL

Q9VFQ3

Related

FBpp0082343

Conserved Domains (1) summary

cd00086
Location:304 – 362
Blast Score: 183

homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.