DSCAML1 DS cell adhesion molecule like 1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: DSCAML1provided by VGNC
Official Full Name: DS cell adhesion molecule like 1provided by VGNC
Primary source: VGNC:VGNC:10394
Locus tag: CK820_G0015755
See related: Ensembl:ENSPTRG00000004326
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 11

Exon count:: 35

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	9	NC_072407.2 (119371418..119759783, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	11	NC_072409.1 (118590534..118958730, complement)

Chromosome 9 - NC_072407.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

D11S1091 (e-PCR)
- UniSTS:29698

D11S3345 (e-PCR)
- UniSTS:152587

D11S2085 (e-PCR)
- UniSTS:150046

DSCAML1__4777 (e-PCR)
- UniSTS:462880

D11S4127 (e-PCR)
- UniSTS:19239

G54698 (e-PCR)
- UniSTS:117800

SHGC-34966 (e-PCR)
- UniSTS:72496

D11S3005 (e-PCR)
- UniSTS:152112

SHGC-147206 (e-PCR)
- UniSTS:175678

D11S1373 (e-PCR)
- UniSTS:148545

WI-14137 (e-PCR)
- UniSTS:20289

D11S1163 (e-PCR)
- UniSTS:33352

D11S2060 (e-PCR)
- UniSTS:34898

D11S2472 (e-PCR)
- UniSTS:14441

G59923 (e-PCR)
- UniSTS:137066

SHGC-144571 (e-PCR)
- UniSTS:182404

RH68617 (e-PCR)
- UniSTS:19356

SHGC-141970 (e-PCR)
- UniSTS:171167

SHGC-105111 (e-PCR)
- UniSTS:169124

RH120709 (e-PCR)
- UniSTS:132790

SHGC-78717 (e-PCR)
- UniSTS:100796

D11S1858 (e-PCR)
- UniSTS:148932

G60568 (e-PCR)
- UniSTS:137674

SHGC-30873 (e-PCR)
- UniSTS:720

D11S2829 (e-PCR)
- UniSTS:152017

D11S2060 (e-PCR)
- UniSTS:56279

D11S29 (e-PCR)
- UniSTS:91102

D11S490 (e-PCR)
- UniSTS:23790

D11S4473 (e-PCR)
- UniSTS:473585

D11S4092 (e-PCR), detects polymorphism
- UniSTS:53492

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables cell-cell adhesion mediator activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in axon guidance	IEA Inferred from Electronic Annotation more info	PubMed
involved_in dendrite self-avoidance	IEA Inferred from Electronic Annotation more info	PubMed
involved_in homophilic cell adhesion via plasma membrane adhesion molecules	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in axon	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: cell adhesion molecule DSCAML1

Names: Down syndrome cell adhesion molecule like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

119371418..119759783 complement

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GenBank, FASTA, Sequence Viewer (Graphics)