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    fyuA pesticin/yersiniabactin receptor protein [ Escherichia coli APEC O1 ]

    Gene ID: 4492541, updated on 8-May-2013
    Gene symbol
    fyuA
    Gene description
    pesticin/yersiniabactin receptor protein
    Locus tag
    APECO1_1063
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli APEC O1 (strain: APEC O1, subtype: ExPEC, serovar: O1:K1, subgroup: APEC)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
    Location :
    isolation source: lesion site (lung) of a dead turkey with colibacillosis
    Sequence :
    NC_008563.1 (2119056..2121077)

    NC_008563.1Genomic Context describing neighboring genes Neighboring gene yersiniabactin biosynthetic protein Neighboring gene yersiniabactin biosynthetic protein YbtT Neighboring gene yersiniabactin siderophore biosynthetic protein Neighboring gene hypothetical protein Neighboring gene autotransporter

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes. Johnson TJ, et al. J Bacteriol, 2007 Apr. PMID 17293413.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    pesticin/yersiniabactin receptor protein

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_008563.1

      Range
      2119056..2121077
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_853080.1 pesticin/yersiniabactin receptor protein [Escherichia coli APEC O1]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A1ACH6
      Conserved Domains (2) summary
      TIGR01783
      Location:57 – 672
      Blast Score: 1131
      TonB-siderophor; TonB-dependent siderophore receptor
      cd01347
      Location:72 – 672
      Blast Score: 504
      ligand_gated_channel; TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. ...
    Nucleotide Protein
    Heading Accession and Version
    genomic CP000468.1 ABJ01366.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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