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TLR2 toll like receptor 2 [ Canis lupus familiaris (dog) ]

Gene ID: 448807, updated on 5-Mar-2024

Summary

Official Symbol
TLR2provided by VGNC
Official Full Name
toll like receptor 2provided by VGNC
Primary source
VGNC:VGNC:59443
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (52140775..52151566)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (51808717..51811083)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (51821784..51824151)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (51404786..51407152)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (51510608..51512974)

Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene transmembrane 131 like Neighboring gene uncharacterized LOC119869313 Neighboring gene ring finger protein 175 Neighboring gene secreted frizzled related protein 2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables triacyl lipopeptide binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
toll-like receptor 2
NP_001005264.2
XP_038543100.1
XP_038543101.1
XP_038543102.1
XP_038543103.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001005264.3NP_001005264.2  toll-like receptor 2 precursor

    See identical proteins and their annotated locations for NP_001005264.2

    Status: PROVISIONAL

    Source sequence(s)
    EU487534
    UniProtKB/TrEMBL
    A0A8F0MPZ8, C0IRA0
    Conserved Domains (6) summary
    PRK15370
    Location:320559
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    smart00255
    Location:641785
    TIR; Toll - interleukin 1 - resistance
    sd00031
    Location:5578
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:177200
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:78136
    LRR_8; Leucine rich repeat
    pfam13306
    Location:57178
    LRR_5; Leucine rich repeats (6 copies)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051819.1 Reference ROS_Cfam_1.0

    Range
    52140775..52151566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038687175.1XP_038543103.1  toll-like receptor 2 isoform X2

    UniProtKB/TrEMBL
    A0A6S4HU21, A0A8C0JM63, A0A8F0MPZ8
    Conserved Domains (6) summary
    PRK15370
    Location:335587
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    smart00255
    Location:641785
    TIR; Toll - interleukin 1 - resistance
    sd00031
    Location:5578
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:177200
    LRR_RI; leucine-rich repeat [structural motif]
    NF033189
    Location:58279
    internalin_A; class 1 internalin InlA
    pfam13855
    Location:78136
    LRR_8; Leucine rich repeat
  2. XM_038687172.1XP_038543100.1  toll-like receptor 2 isoform X1

    UniProtKB/TrEMBL
    A0A8F0MPZ8
    Conserved Domains (6) summary
    PRK15370
    Location:352604
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    smart00255
    Location:658802
    TIR; Toll - interleukin 1 - resistance
    sd00031
    Location:7295
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:194217
    LRR_RI; leucine-rich repeat [structural motif]
    NF033189
    Location:75296
    internalin_A; class 1 internalin InlA
    pfam13855
    Location:95153
    LRR_8; Leucine rich repeat
  3. XM_038687173.1XP_038543101.1  toll-like receptor 2 isoform X2

    UniProtKB/TrEMBL
    A0A6S4HU21, A0A8C0JM63, A0A8F0MPZ8
    Conserved Domains (6) summary
    PRK15370
    Location:335587
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    smart00255
    Location:641785
    TIR; Toll - interleukin 1 - resistance
    sd00031
    Location:5578
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:177200
    LRR_RI; leucine-rich repeat [structural motif]
    NF033189
    Location:58279
    internalin_A; class 1 internalin InlA
    pfam13855
    Location:78136
    LRR_8; Leucine rich repeat
  4. XM_038687174.1XP_038543102.1  toll-like receptor 2 isoform X2

    UniProtKB/TrEMBL
    A0A6S4HU21, A0A8C0JM63, A0A8F0MPZ8
    Conserved Domains (6) summary
    PRK15370
    Location:335587
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    smart00255
    Location:641785
    TIR; Toll - interleukin 1 - resistance
    sd00031
    Location:5578
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:177200
    LRR_RI; leucine-rich repeat [structural motif]
    NF033189
    Location:58279
    internalin_A; class 1 internalin InlA
    pfam13855
    Location:78136
    LRR_8; Leucine rich repeat

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049275.1 Alternate UMICH_Zoey_3.1

    Range
    51404786..51407152
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

    Range
    51510608..51512974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

    Range
    51821784..51824151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    51808717..51811083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)