ass1 argininosuccinate synthetase 1 [Danio rerio] - Gene

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Summary

Official Symbol: ass1provided by ZNC
Official Full Name: argininosuccinate synthetase 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040912-178
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as: ass; zgc:92051; wu:fb95a04; wu:fc01e08
Annotation information: Annotation category: partial on reference assembly

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Genomic context

Location :: chromosome: 5

Sequence :: Chromosome: 5; NC_007116.5 (500760..544843)

See ass1 in MapViewer

Chromosome 5 - NC_007116.5 Genomic Context describing neighboring genes

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Genomic regions, transcripts, and products

Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

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Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

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Function	Evidence Code	Pubs
ATP binding	IEA Inferred from Electronic Annotation more info
argininosuccinate synthase activity	IEA Inferred from Electronic Annotation more info
ligase activity	IEA Inferred from Electronic Annotation more info
nucleotide binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
arginine biosynthetic process	IEA Inferred from Electronic Annotation more info
cellular amino acid biosynthetic process	IEA Inferred from Electronic Annotation more info
urea cycle	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
cellular_component	ND No biological Data available more info

General protein information

Preferred Names: argininosuccinate synthase

Names: argininosuccinate synthase; citrulline--aspartate ligase

NP_001004603.1

EC 6.3.4.5

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NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001004603.1 → NP_001004603.1 argininosuccinate synthase

Status: PROVISIONAL

Source sequence(s)

BC081578

UniProtKB/Swiss-Prot

Q66I24

Conserved Domains (2) summary

cd01999
Location:6 – 397
Blast Score: 1532

Argininosuccinate_Synthase; Argininosuccinate synthase. The Argininosuccinate synthase is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate . In ...

COG0137
Location:1 – 405
Blast Score: 1378

ArgG; Argininosuccinate synthase [Amino acid transport and metabolism]

RefSeqs of Annotated Genomes: Build 5.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zv9 Primary Assembly

Genomic

NC_007116.5 Reference Zv9 Primary Assembly

Range

500760..544843

Download

GenBank, FASTA, Sequence Viewer (Graphics)

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Related Sequences

Nucleotide		Protein
Heading	Accession and Version	Protein
genomic	HB892520.1	CBF71358.1
genomic	HB898782.1	CBF77575.1
genomic	HB902575.1	CBF81554.1
genomic	HB948532.1	CBG08969.1
genomic	HB956594.1	CBG12921.1
genomic	HC949929.1	CBU95172.1
genomic	HC956191.1	CBU98173.1
genomic	HC959984.1	CBV00003.1
genomic	HD005942.1	CBV22491.1
genomic	HD014004.1	CBV26435.1
mRNA	BC081578.1	AAH81578.1
mRNA	BC154282.1	AAI54283.1