arrb1.S arrestin beta 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: arrb1.S
Official Full Name: arrestin beta 1 S homeolog
Primary source: Xenbase:XB-GENE-481582
Locus tag: XELAEV_18016461mg
See related: EnsemblRapid:ENSXLAG00005013258
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: arb1; arr1; arrb1; barr1; arrb1.L; arrestin; betaarr1
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Genomic context

Location:: chromosome: 2S

Exon count:: 18

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2S	NC_054374.1 (166324582..166413055)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2S	NC_030727.1 (156816456..156907684)

Chromosome 2S - NC_054374.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables G protein-coupled receptor binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within G protein-coupled receptor internalization	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within negative regulation of Notch signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within negative regulation of signal transduction	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of ERK1 and ERK2 cascade	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within signal transduction	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within visual perception	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cell projection	IEA Inferred from Electronic Annotation more info
located_in clathrin-coated pit	IEA Inferred from Electronic Annotation more info
located_in cytoplasmic vesicle	IEA Inferred from Electronic Annotation more info
located_in cytosol	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info
located_in pseudopodium	IEA Inferred from Electronic Annotation more info
located_in vesicle	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: arrestin beta 1 S homeolog

Names: arrestin 1; arrestin beta 1 L homeolog; beta-arrestin 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094402.1 → NP_001087871.1 arrestin beta 1 S homeolog

See identical proteins and their annotated locations for NP_001087871.1

Status: PROVISIONAL

Source sequence(s)

BC082399

UniProtKB/TrEMBL

A0A974GZQ9, Q641D8

Related

ENSXLAP00005039261.1, ENSXLAT00005040182.1

Conserved Domains (2) summary

smart01017
Location:194 → 350

Arrestin_C; Arrestin (or S-antigen), C-terminal domain

pfam00339
Location:46 → 175

Arrestin_N; Arrestin (or S-antigen), N-terminal domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

166324582..166413055

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041583195.1 → XP_041439129.1 arrestin beta 1 S homeolog isoform X4

UniProtKB/TrEMBL

A0A8J1MBP8, A0A974GZQ9

Related

ENSXLAP00005039256.1, ENSXLAT00005040177.1

Conserved Domains (1) summary

smart01017
Location:193 → 357

Arrestin_C; Arrestin (or S-antigen), C-terminal domain
XM_041583194.1 → XP_041439128.1 arrestin beta 1 S homeolog isoform X3

UniProtKB/TrEMBL

A0A8J1MC27, A0A974GZQ9

Conserved Domains (1) summary

smart01017
Location:235 → 399

Arrestin_C; Arrestin (or S-antigen), C-terminal domain
XM_041583192.1 → XP_041439126.1 arrestin beta 1 S homeolog isoform X1

UniProtKB/TrEMBL

A0A8J1MCP5, A0A974GZQ9

Related

ENSXLAP00005039178.1, ENSXLAT00005040099.1

Conserved Domains (1) summary

smart01017
Location:235 → 399

Arrestin_C; Arrestin (or S-antigen), C-terminal domain
XM_041583193.1 → XP_041439127.1 arrestin beta 1 S homeolog isoform X2

UniProtKB/TrEMBL

A0A8J1MBQ3, A0A974GZQ9

Related

ENSXLAP00005039199.1, ENSXLAT00005040120.1

Conserved Domains (1) summary

smart01017
Location:235 → 391

Arrestin_C; Arrestin (or S-antigen), C-terminal domain