cul3.L cullin 3 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: cul3.L
Official Full Name: cullin 3 L homeolog
Primary source: Xenbase:XB-GENE-974989
Locus tag: XELAEV_18027771mg
See related: EnsemblRapid:ENSXLAG00005017109
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: cul3; cul3a; cul3-a; cul3-b; CUL-3-A; Cullin-3-A
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Genomic context

Location:: chromosome: 5L

Exon count:: 16

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5L	NC_054379.1 (132363524..132411969)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5L	NC_030732.1 (121606016..121655083)

Chromosome 5L - NC_054379.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ubiquitin protein ligase binding	IEA Inferred from Electronic Annotation more info
contributes_to ubiquitin-protein transferase activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within COPII vesicle coating	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within cell cycle	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cell division	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cell migration	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within embryonic cleavage	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within endoplasmic reticulum to Golgi vesicle-mediated transport	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within integrin-mediated signaling pathway	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within mitotic metaphase chromosome alignment	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within negative regulation of Rho protein signal transduction	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within positive regulation of mitotic cell cycle phase transition	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within positive regulation of mitotic metaphase/anaphase transition	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within proteasome-mediated ubiquitin-dependent protein catabolic process	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within protein monoubiquitination	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within protein ubiquitination	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein ubiquitination	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within stem cell division	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within stress fiber assembly	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within ubiquitin-dependent protein catabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within vesicle-mediated transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of Cul3-RING ubiquitin ligase complex	IEA Inferred from Electronic Annotation more info
part_of Cul3-RING ubiquitin ligase complex	ISS Inferred from Sequence or Structural Similarity more info
located_in centrosome	ISS Inferred from Sequence or Structural Similarity more info
part_of cullin-RING ubiquitin ligase complex	IEA Inferred from Electronic Annotation more info
located_in mitotic spindle	ISS Inferred from Sequence or Structural Similarity more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
located_in nucleus	ISS Inferred from Sequence or Structural Similarity more info
located_in polar microtubule	ISS Inferred from Sequence or Structural Similarity more info
located_in spindle pole	ISS Inferred from Sequence or Structural Similarity more info

General protein information

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Preferred Names: cullin-3-A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093183.1 → NP_001086652.1 cullin-3-A

See identical proteins and their annotated locations for NP_001086652.1

Status: PROVISIONAL

Source sequence(s)

BC077239

UniProtKB/Swiss-Prot

Q6DE95

UniProtKB/TrEMBL

A0A974HK25

Related

ENSXLAP00005050479.1, ENSXLAT00005051620.1

Conserved Domains (3) summary

smart00182
Location:421 → 563

CULLIN; Cullin

pfam00888
Location:35 → 664

Cullin; Cullin family

pfam10557
Location:700 → 760

Cullin_Nedd8; Cullin protein neddylation domain