commd5 COMM domain containing 5 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: commd5provided by ZNC
Official Full Name: COMM domain containing 5provided by ZNC
Primary source: ZFIN:ZDB-GENE-040801-71
See related: Ensembl:ENSDARG00000029660 AllianceGenome:ZFIN:ZDB-GENE-040801-71
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:101132
Summary: Predicted to be active in nucleus. Orthologous to human COMMD5 (COMM domain containing 5). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 14

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	14	NC_007125.7 (10374530..10387363, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	14	NC_007125.6 (10068516..10081349, complement)

Chromosome 14 - NC_007125.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: COMM domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001003553.2 → NP_001003553.1 COMM domain-containing protein 5

See identical proteins and their annotated locations for NP_001003553.1

Status: PROVISIONAL

Source sequence(s)

BC078284

UniProtKB/TrEMBL

Q6DC11

Related

ENSDARP00000113724.1, ENSDART00000145118.2

Conserved Domains (1) summary

cd04753
Location:96 → 205

Commd5_HCaRG; COMM_Domain containing protein 5, also called HCaRG (hypertension-related, calcium-regulated gene). HCaRG is a nuclear protein that might be involved in cell proliferation; it is negatively regulated by extracellular calcium concentration, and its basal ...