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COL1A2 collagen type I alpha 2 chain [ Ovis aries (sheep) ]

Gene ID: 443512, updated on 5-Mar-2024

Summary

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Gene symbol
COL1A2
Gene description
collagen type I alpha 2 chain
See related
EnsemblRapid:ENSOARG00020017657
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
52
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 4 NC_056057.1 (12552707..12589620)

Chromosome 4 - NC_056057.1Genomic Context describing neighboring genes Neighboring gene Bet1 golgi vesicular membrane trafficking protein Neighboring gene uncharacterized LOC132659662 Neighboring gene uncharacterized LOC132659661 Neighboring gene CAS1 domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056057.1 Chromosome 4 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-2(I) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056057.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    12552707..12589620
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004007726.6 → XP_004007775.1  collagen alpha-2(I) chain

    See identical proteins and their annotated locations for XP_004007775.1

    UniProtKB/TrEMBL
    A0A6P3E8P5, W5NTT7
    Related
    ENSOARP00020022556.1, ENSOART00020027189.2
    Conserved Domains (2) summary
    pfam01391
    Location:467 → 526
    Collagen; Collagen triple helix repeat (20 copies)
    pfam01410
    Location:1132 → 1363
    COLFI; Fibrillar collagen C-terminal domain
Nucleotide Protein Strain
Heading Accession and Version

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