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    CG34109 [ Drosophila melanogaster ]

    Gene ID: 4379890, updated on 10-May-2012
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    Summary

    Official Symbol
    CG34109provided by Flybase
    Primary source
    FLYBASE:FBgn0083945
    Locus tag
    Dmel_CG34109
    Gene type
    protein coding
    RNA name
    CG34109
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG12441; CG13128; CG13129; Dmel\CG34109
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    Genomic context

    Location :
    31A2-31A2
    Sequence :
    Chromosome: 2L; NT_033779.4 (10094088..10125736)
    See CG34109 in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene CG31714 gene product from transcript CG31714-RB Neighboring gene CG13133 gene product from transcript CG13133-RA Neighboring gene CG42843 gene product from transcript CG42843-RB Neighboring gene CG13135 gene product from transcript CG13135-RA Neighboring gene CG4839 gene product from transcript CG4839-RB Neighboring gene CG13137 gene product from transcript CG13137-RB

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. The transcriptional diversity of 25 Drosophila cell lines. Cherbas L, et al. Genome Res, 2011 Feb. PMID 21177962.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:607119 BioGRID:61208 CG13083    BioGRID  PubMed Two-hybrid 
    BioGRID:607119 BioGRID:59327 CG15459    BioGRID  PubMed Two-hybrid 
    BioGRID:607119 BioGRID:57914 HLH4C    BioGRID  PubMed Two-hybrid 
    BioGRID:607119 BioGRID:64391 RpL14    BioGRID  PubMed Two-hybrid 
    BioGRID:607119 BioGRID:68427 Sry-alpha    BioGRID  PubMed Two-hybrid 
    BioGRID:607119 BioGRID:77953 scaf6    BioGRID  PubMed Two-hybrid 
    BioGRID:607119 BioGRID:68196 wdb    BioGRID  PubMed Two-hybrid 
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    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    neurogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		  
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    General protein information

    Preferred Names
    CG34109 gene product from transcript CG34109-RC
    Names
    CG34109
    CG34109-PC
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      10094088..10125736
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001042886.3 → NP_001036351.2  CG34109 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0IGY6
      Related
      FBpp0289652
      Conserved Domains (1) summary
      cl00781
      Location:304 – 429
      Blast Score: 210
      DUF389; Domain of unknown function (DUF389)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014134.5 ABI31305.2
    mRNA BT028784.1 ABI34165.1
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content