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tnfsf10 tumor necrosis factor (ligand) superfamily, member 10 [ Danio rerio (zebrafish) ]

Gene ID: 436866, updated on 3-Oct-2014
Official Symbol
tnfsf10provided by ZNC
Official Full Name
tumor necrosis factor (ligand) superfamily, member 10provided by ZNC
Primary source
ZFIN:ZDB-GENE-040718-335
See related
Ensembl:ENSDARG00000057241; Vega:OTTDARG00000021368
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
tnfsf10l2; zgc:92320
See tnfsf10 in MapViewer
Location:
chromosome: 24
Exon count:
5
Annotation release Status Assembly Chr Location
104 current GRCz10 (GCF_000002035.5) 24 NC_007135.6 (26853362..26858367)
103 previous assembly Zv9 (GCF_000002035.4) 24 NC_007135.5 (27802775..27807780)

Chromosome 24 - NC_007135.6Genomic Context describing neighboring genes Neighboring gene neutral cholesterol ester hydrolase 1-like Neighboring gene neutral cholesterol ester hydrolase 1b Neighboring gene male-specific lethal 2 homolog b (Drosophila) Neighboring gene cohesin subunit SA-1

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
cytokine activity IEA
Inferred from Electronic Annotation
more info
 
tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
immune response IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
extracellular space IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
tumor necrosis factor ligand superfamily member 10
Names
tumor necrosis factor ligand superfamily member 10
DL2
tumor necrosis factor (ligand) superfamily, member 10 like 2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002593.1NP_001002593.1  tumor necrosis factor ligand superfamily member 10

    See proteins identical to NP_001002593.1

    Status: PROVISIONAL

    Source sequence(s)
    BC076005
    UniProtKB/TrEMBL
    Q6DHG9
    Related
    ENSDARP00000074299, OTTDARP00000022240, ENSDART00000079848, OTTDART00000027141
    Conserved Domains (1) summary
    cd00184
    Location:128296
    TNF; Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT (lymphotoxin-alpha, TNF-beta), CD40 ligand, Apo2L (TRAIL), Fas ligand, and osteoprotegerin (OPG) ligand. These proteins generally have an intracellular N-terminal ...

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz10 Primary Assembly

Genomic

  1. NC_007135.6 

    Range
    26853362..26858367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)