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    fig fos intronic gene [ Drosophila melanogaster ]

    Gene ID: 43511, updated on 21-Jan-2012
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    Summary

    Official Symbol
    figprovided by Flybase
    Official Full Name
    fos intronic geneprovided by Flybase
    Primary source
    FLYBASE:FBgn0039694
    Locus tag
    Dmel_CG7615
    Gene type
    protein coding
    RNA name
    fos intronic gene
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG7615; Dmel\CG7615
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    Genomic context

    Location :
    99C1-99C1
    Sequence :
    Chromosome: 3R; NT_033777.2 (25605018..25606174, complement)
    See fig in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene ATP synthase-gamma chain Neighboring gene CG1973 gene product from transcript CG1973-RA Neighboring gene kayak Neighboring gene CG7837 gene product from transcript CG7837-RA Neighboring gene shroud Neighboring gene CG7788 gene product from transcript CG7788-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. The gene structure of the Drosophila melanogaster proto-oncogene, kayak, and its nested gene, fos-intronic gene. Hudson SG, et al. Gene, 2008 Aug 15. PMID 18571877.
    2. Phylogenetic and genomewide analyses suggest a functional relationship between kayak, the Drosophila fos homolog, and fig, a predicted protein phosphatase 2c nested within a kayak intron. Hudson SG, et al. Genetics, 2007 Nov. PMID 18039871.
    3. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    4. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    5. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:68375 BioGRID:58346 CG3099    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
    		  
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    General protein information

    Preferred Names
    CG7615 gene product from transcript CG7615-RA
    Names
    CG7615-PA
    fig-PA
    fos intron gene
    fos intronic gene
    fos-intronic gene
    NP_651724.1
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      25605018..25606174, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143467.2 → NP_651724.1  fos intronic gene [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VAH4
      Related
      FBpp0084904, FBtr0085538
      Conserved Domains (1) summary
      cl00120
      Location:68 – 271
      Blast Score: 176
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014297.2 AAF56936.1
    mRNA DQ858472.1 ABI74754.1
    mRNA BT044569.1 ACI16531.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VAH4.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content