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    CG5003 [ Drosophila melanogaster ]

    Gene ID: 43344, updated on 4-Feb-2012
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    Summary

    Official Symbol
    CG5003provided by Flybase
    Primary source
    FLYBASE:FBgn0039554
    Locus tag
    Dmel_CG5003
    Gene type
    protein coding
    RNA name
    CG5003
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5003
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    Genomic context

    Location :
    98B5-98B6
    Sequence :
    Chromosome: 3R; NT_033777.2 (23739491..23742249, complement)
    See CG5003 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene Odorant receptor 98a Neighboring gene CG12426 gene product from transcript CG12426-RB Neighboring gene CG5017 gene product from transcript CG5017-RA Neighboring gene mitochondrial ribosomal protein S22 Neighboring gene CG33213 gene product from transcript CG33213-RA Neighboring gene CG12259 gene product from transcript CG12259-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Vector and parameters for targeted transgenic RNA interference in Drosophila melanogaster. Ni JQ, et al. Nat Methods, 2008 Jan. PMID 18084299.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970.

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:68226 BioGRID:68567 CycG    BioGRID  PubMed Two-hybrid 
    BioGRID:68226 BioGRID:65669 CycH    BioGRID  PubMed Two-hybrid 
    BioGRID:68226 BioGRID:65629 SAK    BioGRID  PubMed Two-hybrid 
    BioGRID:68226 BioGRID:57584 skpA    BioGRID  PubMed Two-hybrid 
    BioGRID:68226 BioGRID:62080 skpB    BioGRID  PubMed Two-hybrid 
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    General protein information

    Preferred Names
    CG5003 gene product from transcript CG5003-RA
    Names
    CG5003
    CG5003-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      23739491..23742249, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143336.1 → NP_651593.1  CG5003 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VAZ0
      Related
      FBpp0084641, FBtr0085272
      Conserved Domains (1) summary
      cl02535
      Location:68 – 114
      Blast Score: 99
      F-box; F-box domain
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA BT050470.1 ACJ13177.1
    genomic AE014297.2 AAF56756.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VAZ0.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content