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    CG12885 [ Drosophila melanogaster ]

    Gene ID: 43308, updated on 9-May-2012
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    Summary

    Official Symbol
    CG12885provided by Flybase
    Primary source
    FLYBASE:FBgn0039523
    Locus tag
    Dmel_CG12885
    Gene type
    protein coding
    RNA name
    CG12885
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12885
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    Genomic context

    Location :
    98A4-98A4
    Sequence :
    Chromosome: 3R; NT_033777.2 (23356035..23359655)
    See CG12885 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene CG5402 gene product from transcript CG5402-RA Neighboring gene CG13972 gene product from transcript CG13972-RA Neighboring gene Gustatory receptor 98b Neighboring gene Gustatory receptor 98c

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Paucity of chimeric gene-transposable element transcripts in the Drosophila melanogaster genome. Lipatov M, et al. BMC Biol, 2005 Nov 12. PMID 16283942.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:68192 BioGRID:61863 CG1418    BioGRID  PubMed Two-hybrid 
    BioGRID:68192 BioGRID:61230 msb1l    BioGRID  PubMed Two-hybrid 
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    General protein information

    Preferred Names
    CG12885 gene product from transcript CG12885-RA
    Names
    CG12885
    CG12885-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      23356035..23359655
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143310.2 → NP_651567.2  CG12885 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VB27
      Related
      FBpp0084555, FBtr0085185
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014297.2 AAF56716.2
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VB27.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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