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    CG6425 [ Drosophila melanogaster ]

    Gene ID: 43216, updated on 9-May-2012
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    Summary

    Official Symbol
    CG6425provided by Flybase
    Primary source
    FLYBASE:FBgn0039449
    Locus tag
    Dmel_CG6425
    Gene type
    protein coding
    RNA name
    CG6425
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6425
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    Genomic context

    Location :
    97C5-97C5
    Sequence :
    Chromosome: 3R; NT_033777.2 (22540884..22543107, complement)
    See CG6425 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene TweedleQ Neighboring gene amontillado Neighboring gene CG5484 gene product from transcript CG5484-RC Neighboring gene CG6420 gene product from transcript CG6420-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Computational identification of Ftz/Ftz-F1 downstream target genes. Bowler T, et al. Dev Biol, 2006 Nov 1. PMID 16996052.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:68111 BioGRID:72654 CG3713    BioGRID  PubMed Two-hybrid 
    BioGRID:68111 BioGRID:63528 CG3880    BioGRID  PubMed Two-hybrid 
    BioGRID:68111 BioGRID:60514 CHIP    BioGRID  PubMed Two-hybrid 
    BioGRID:68111 BioGRID:61984 Cpr47Ea    BioGRID  PubMed Two-hybrid 
    BioGRID:68111 BioGRID:72482 CycK    BioGRID  PubMed Two-hybrid 
    BioGRID:68111 BioGRID:67060 Scp2    BioGRID  PubMed Two-hybrid 
    BioGRID:68111 BioGRID:62178 Taz    BioGRID  PubMed Two-hybrid 
    BioGRID:68111 BioGRID:67071 nonA-l    BioGRID  PubMed Two-hybrid 
    BioGRID:68111 BioGRID:68911 sip1    BioGRID  PubMed Two-hybrid 
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    General protein information

    Preferred Names
    CG6425 gene product from transcript CG6425-RA
    Names
    CG6425
    CG6425-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      22540884..22543107, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143240.2 → NP_651497.1  CG6425 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VBC6
      Related
      FBpp0084419, FBtr0085047
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY061180.1 AAL28728.1
    genomic AE014297.2 AAF56616.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VBC6.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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