My NCBISign In

Display Settings:

Format

Send to:

Choose Destination

    Mst57Db Male-specific RNA 57Db [ Drosophila melanogaster ]

    Gene ID: 43122, updated on 10-May-2012
    Help top of page

    Summary

    Official Symbol
    Mst57Dbprovided by Flybase
    Official Full Name
    Male-specific RNA 57Dbprovided by Flybase
    Primary source
    FLYBASE:FBgn0011669
    Locus tag
    Dmel_CG5016
    Gene type
    protein coding
    RNA name
    Male-specific RNA 57Db
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5016; Dmel\CG5016; mst(2)ag-1; mst-1
    Help top of page

    Genomic context

    Location :
    96F3-96F3
    Sequence :
    Chromosome: 3R; NT_033777.2 (21656444..21656636, complement)
    See Mst57Db in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene Male-specific RNA 57Dc Neighboring gene Seminal fluid protein 96F Neighboring gene Male-specific RNA 57Da Neighboring gene CG5878 gene product from transcript CG5878-RB

    Help top of page

    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
    Helptop of page

    Bibliography

    Related articles in PubMed

    1. Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. Dottorini T, et al. BMC Bioinformatics, 2011 Jan 26. PMID 21269436.
    2. Accentuate the negative: proteome comparisons using the negative proteome database. Reiter LT, et al. Fly (Austin), 2007 May-Jun. PMID 18820470.
    3. Sustained post-mating response in Drosophila melanogaster requires multiple seminal fluid proteins. Ram KR, et al. PLoS Genet, 2007 Dec. PMID 18085830.
    4. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    5. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Help top of page

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:68028 BioGRID:72720 ACXA    BioGRID  PubMed Two-hybrid 
    BioGRID:68028 BioGRID:63867 CG11486    BioGRID  PubMed Two-hybrid 
    BioGRID:68028 BioGRID:70621 Exp6    BioGRID  PubMed Two-hybrid 
    Help top of page

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    oviposition NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    post-mating behavior NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    extracellular region NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Help top of page

    General protein information

    Preferred Names
    CG5016 gene product from transcript CG5016-RA
    Names
    CG5016-PA
    Male-specific RNA 57Db
    Mst57Db-PA
    male specific transcript 57D
    Help top of page

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      21656444..21656636, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079775.4 → NP_524499.2  Male-specific RNA 57Db [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VBL7
      Related
      FBpp0084289
    Help top of page

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014297.2 AAF56514.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VBL7.1 GenPept
    Help top of page

    Additional Links

    Gene LinkOut

      Supplemental Content

      Recent activity

      Clear Turn Off Turn On

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...