RpL27 Ribosomal protein L27 [Drosophila melanogaster] - Gene

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Summary

Official Symbol: RpL27provided by Flybase
Official Full Name: Ribosomal protein L27provided by Flybase
Primary source: FLYBASE:FBgn0039359
Locus tag: Dmel_CG4759
Gene type: protein coding
RNA name: ribosomal protein L27
RefSeq status: REVIEWED
Organism: Drosophila melanogaster
Lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as: CG4759; Dmel\CG4759; M(3)96CF; RpL27e

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Genomic context

Location :: 96E9-96E10

Sequence :: Chromosome: 3R; NT_033777.2 (21509460..21510813, complement)

See RpL27 in Epigenomics, MapViewer

Chromosome 3R - NT_033777.2 Genomic Context describing neighboring genes

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Genomic regions, transcripts, and products

Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

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Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

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Interactions

Products	Interactant	Other Gene	Source	Pubs	Description
BioGRID:68014	BioGRID:61662	CG11635	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:66221	CG11768	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:63659	CG13907	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:63777	CG13937	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:62658	CG14478	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:58015	CG15764	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:65924	CG2046	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:64754	CG32100	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:59869	CG3225	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:58118	CG32732	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:62713	CG5009	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:65616	CG6049	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:64175	CG8219	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:60253	CG8349	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:66982	CG9632	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:77927	Ddr	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:61484	Epac	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:58605	LIMK1	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:62880	Tab2	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:1073145	calypso	BioGRID	PubMed	Affinity Capture-MS
BioGRID:68014	BioGRID:62251	cnn	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:61072	elfless	BioGRID	PubMed	Two-hybrid
BioGRID:68014	BioGRID:61489	koi	BioGRID	PubMed	Two-hybrid

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General gene information

Pathways from BioSystems

Cap-dependent Translation Initiation, organism-specific biosystem (from REACTOME)
Cap-dependent Translation Initiation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Cytoplasmic Ribosomal Proteins, organism-specific biosystem (from WikiPathways)
Cytoplasmic Ribosomal Proteins, organism-specific biosystem
Cytoplasmic Ribosomal Proteins
Eukaryotic Translation Elongation, organism-specific biosystem (from REACTOME)
Eukaryotic Translation Elongation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Eukaryotic Translation Initiation, organism-specific biosystem (from REACTOME)
Eukaryotic Translation Initiation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Eukaryotic Translation Termination, organism-specific biosystem (from REACTOME)
Eukaryotic Translation Termination, organism-specific biosystemcomputationally inferred pathway (not manually curated)
GTP hydrolysis and joining of the 60S ribosomal subunit, organism-specific biosystem (from REACTOME)
GTP hydrolysis and joining of the 60S ribosomal subunit, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Gene Expression, organism-specific biosystem (from REACTOME)
Gene Expression, organism-specific biosystemcomputationally inferred pathway (not manually curated)
L13a-mediated translational silencing of Ceruloplasmin expression, organism-specific biosystem (from REACTOME)
L13a-mediated translational silencing of Ceruloplasmin expression, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Metabolism of proteins, organism-specific biosystem (from REACTOME)
Metabolism of proteins, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Peptide chain elongation, organism-specific biosystem (from REACTOME)
Peptide chain elongation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Ribosome, organism-specific biosystem (from KEGG)
Ribosome, organism-specific biosystem
Ribosome
Ribosome, conserved biosystem (from KEGG)
Ribosome, conserved biosystem
Ribosome
Ribosome, eukaryotes, organism-specific biosystem (from KEGG)
Ribosome, eukaryotes, organism-specific biosystemStructural complex; Genetic information processing; Ribosome
SRP-dependent cotranslational protein targeting to membrane, organism-specific biosystem (from REACTOME)
SRP-dependent cotranslational protein targeting to membrane, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Translation, organism-specific biosystem (from REACTOME)
Translation, organism-specific biosystemcomputationally inferred pathway (not manually curated)

Gene Ontology Provided by FlyBase

Function	Evidence Code	Pubs
structural constituent of ribosome	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
centrosome duplication	IMP Inferred from Mutant Phenotype more info
centrosome organization	IMP Inferred from Mutant Phenotype more info
mitotic spindle elongation	IMP Inferred from Mutant Phenotype more info	PubMed
mitotic spindle organization	IMP Inferred from Mutant Phenotype more info	PubMed
translation	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
cytosolic large ribosomal subunit	ISS Inferred from Sequence or Structural Similarity more info

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General protein information

Preferred Names: CG4759 gene product from transcript CG4759-RA

Names: CG4759-PA; RpL27-PA; ribosomal protein L27

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NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NT_033777.2

Range

21509460..21510813, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_143160.1 → NP_651417.1 ribosomal protein L27 [Drosophila melanogaster]

Status: REVIEWED

UniProtKB/TrEMBL

Q9VBN5

Related

FBpp0084306, FBtr0084932

Conserved Domains (3) summary

PTZ00471
Location:1 – 135
Blast Score: 294

PTZ00471; 60S ribosomal protein L27; Provisional

cl00354
Location:8 – 32
Blast Score: 76

KOW; KOW motif

pfam01777
Location:75 – 135
Blast Score: 213

Ribosomal_L27e; Ribosomal L27e protein family