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VANGL2 VANGL planar cell polarity protein 2 [ Gallus gallus (chicken) ]

Gene ID: 426903, updated on 3-Apr-2024

Summary

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Symbol
VANGL2provided by CGNC
Full Name
VANGL planar cell polarity protein 2provided by CGNC
Primary source
CGNC:17051
See related
Ensembl:ENSGALG00010027699
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (1216371..1229131, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (1217546..1230266, complement)

Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene T-lymphocyte surface antigen Ly-9-like Neighboring gene uncharacterized LOC121107558 Neighboring gene uncharacterized LOC107055095 Neighboring gene nescient helix-loop-helix 1 Neighboring gene nicastrin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Maintained expression of the planar cell polarity molecule Vangl2 and reformation of hair cell orientation in the regenerating inner ear. Warchol ME, et al. J Assoc Res Otolaryngol, 2010 Sep. PMID 20177731, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. asymmetrically expressed on cells within the sensory epithelium; this expression pattern is maintained after ototoxic injury and throughout regeneration
    Title: Maintained expression of the planar cell polarity molecule Vangl2 and reformation of hair cell orientation in the regenerating inner ear.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Wnt signaling pathway, planar cell polarity pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of planar polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vang-like protein 2
Names
vang-like 2 (van gogh, Drosophila)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1216371..1229131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046903997.1 → XP_046759953.1  vang-like protein 2 isoform X1

    Related
    ENSGALP00010041035.1, ENSGALT00010067131.1

  2. XM_046903996.1 → XP_046759952.1  vang-like protein 2 isoform X1

  3. XM_046903995.1 → XP_046759951.1  vang-like protein 2 isoform X1

  4. XM_015298381.4 → XP_015153867.1  vang-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AHC3
    Conserved Domains (1) summary
    pfam06638
    Location:34 → 521
    Strabismus; Strabismus protein

  5. XM_015298382.4 → XP_015153868.1  vang-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AFD6
    Related
    ENSGALP00010041032.1, ENSGALT00010067128.1
    Conserved Domains (1) summary
    pfam06638
    Location:9 → 470
    Strabismus; Strabismus protein

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1217546..1230266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046932690.1 → XP_046788646.1  vang-like protein 2 isoform X1

  2. XM_046932689.1 → XP_046788645.1  vang-like protein 2 isoform X1

  3. XM_046932688.1 → XP_046788644.1  vang-like protein 2 isoform X1

  4. XM_040691039.2 → XP_040546973.1  vang-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AHC3
    Conserved Domains (1) summary
    pfam06638
    Location:34 → 521
    Strabismus; Strabismus protein

  5. XM_040691040.2 → XP_040546974.1  vang-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AFD6
    Conserved Domains (1) summary
    pfam06638
    Location:9 → 470
    Strabismus; Strabismus protein
Nucleotide Protein Strain
Heading Accession and Version

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